DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC1 and Slc25a12

DIOPT Version :10

Sequence 1:NP_650134.1 Gene:GC1 / 41448 FlyBaseID:FBgn0260743 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_001386198.1 Gene:Slc25a12 / 362145 RGDID:1305181 Length:677 Species:Rattus norvegicus


Alignment Length:285 Identity:123/285 - (43%)
Similarity:172/285 - (60%) Gaps:20/285 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 GGIAGIIGVTCVFPLDLVKTRLQNQQIGPN---GERMYNSMFDCFRKTYKAEGYFGMYRGSGVNI 89
            |.:||.:|.|.|:|:||||||:|||: |..   ||.||.:.||||:|..:.||:||:|||....:
  Rat   333 GSVAGAVGATAVYPIDLVKTRMQNQR-GTGSVVGELMYKNSFDCFKKVLRYEGFFGLYRGLIPQL 396

  Fly    90 LLITPEKAIKLTANDYFRHKLTTKDGKLPLTSQMVAGGLAGAFQIIVTTPMELLKIQMQDAGRVA 154
            :.:.||||||||.||:.|.|.|.:||.:||.::::|||.||..|:|.|.|:|::||::|.||.:.
  Rat   397 IGVAPEKAIKLTVNDFVRDKFTRRDGSIPLPAEILAGGCAGGSQVIFTNPLEIVKIRLQVAGEIT 461

  Fly   155 AAAKLAGKTVEKVSATQLASQLIKDKGIFGLYKGIGATGLRDVTFSIIYFPLFATLNDLGPRRND 219
            ...:::            |..:::|.|:||||||..|..|||:.||.||||::|....|....|.
  Rat   462 TGPRVS------------ALNVLQDLGLFGLYKGAKACFLRDIPFSAIYFPVYAHCKLLLADENG 514

  Fly   220 GSGEAVFWCSFLAGLAAGSTAALAVNPFDVVKTRLQAIKKADGEKEFKGISDCITKTLKHEGPTA 284
            ..|....   ..||..||..||..|.|.||:|||||...:| |:..:.|:.||..|.|:.|||:|
  Rat   515 HVGGINL---LTAGAMAGVPAASLVTPADVIKTRLQVAARA-GQTTYSGVIDCFRKILREEGPSA 575

  Fly   285 FFKGGLCRMIVIAPLFGIAQTVYYL 309
            |:||...|:...:|.||:....|.|
  Rat   576 FWKGTAARVFRSSPQFGVTLVTYEL 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC1NP_650134.1 PTZ00169 37..294 CDD:240302 114/259 (44%)
Slc25a12NP_001386198.1 FRQ1 12..125 CDD:444056
Mito_carr 327..420 CDD:395101 46/87 (53%)
Mito_carr 422..513 CDD:395101 39/102 (38%)
Mito_carr 514..609 CDD:395101 36/91 (40%)
Blue background indicates that the domain is not in the aligned region.

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