DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC1 and CG8026

DIOPT Version :10

Sequence 1:NP_650134.1 Gene:GC1 / 41448 FlyBaseID:FBgn0260743 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_724769.2 Gene:CG8026 / 35941 FlyBaseID:FBgn0033391 Length:322 Species:Drosophila melanogaster


Alignment Length:315 Identity:80/315 - (25%)
Similarity:132/315 - (41%) Gaps:46/315 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 IINGGIAGIIGVTCVFPLDLVKTRLQNQQIGPNGER-----MYNSMFDCFRKTYKAEGYFGMYRG 84
            ::.|...|::....:.||||:|.|     ...|..|     .|..:...|...::.||:.|:|:|
  Fly    26 LVAGVSGGVVSTLILHPLDLIKIR-----FAVNDGRTATVPQYRGLSSAFTTIFRQEGFRGLYKG 85

  Fly    85 SGVNILLITPEKAIKLTAND---YFRHKLTTK------DGKLPL--TSQMVAGGLAGAFQIIVTT 138
                   :||.  :..:.:.   ||....|.|      :..:||  |..|:|...:|...:::|.
  Fly    86 -------VTPN--VWGSGSSWGLYFMFYNTIKTFIQGGNTTMPLGPTMNMLAAAESGILTLLLTN 141

  Fly   139 PMELLKIQMQDAGRVAAAAKLAGKTVEKVSATQLASQLIKDKGIFGLYKGIGATGLRDVTFSIIY 203
            |:.::|.::......|::|:..|       ......|:.|::||.|||:|. ..|:..|:...|.
  Fly   142 PIWVVKTRLCLQCDAASSAEYRG-------MIHALGQIYKEEGIRGLYRGF-VPGMLGVSHGAIQ 198

  Fly   204 FPLFATL-NDLGPRRNDGSGEAVFWCSFLAGLAAGS-TAALAVNPFDVVKTRLQAIKKADGEKEF 266
            |..:..| |.....|.......:....:||..|... .||.|..|:.||:.|||     |....:
  Fly   199 FMTYEELKNAYNEYRKLPIDTKLATTEYLAFAAVSKLIAAAATYPYQVVRARLQ-----DHHHRY 258

  Fly   267 KGISDCITKTLKHEGPTAFFKGGLCRMIVIAPLFGIAQTVYYLGVAEGLLGYQKK 321
            .|..|||.:|.:.||...|:||....:..:.|...:...||. .|:..||..:|:
  Fly   259 NGTWDCIKQTWRFEGYRGFYKGLKASLTRVVPACMVTFLVYE-NVSHFLLARRKR 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC1NP_650134.1 PTZ00169 37..294 CDD:240302 71/274 (26%)
CG8026NP_724769.2 Mito_carr 23..115 CDD:395101 23/102 (23%)
Mito_carr 119..213 CDD:395101 26/101 (26%)
Mito_carr 220..307 CDD:395101 27/92 (29%)

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