DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC1 and Ucp4B

DIOPT Version :10

Sequence 1:NP_650134.1 Gene:GC1 / 41448 FlyBaseID:FBgn0260743 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_608977.1 Gene:Ucp4B / 33833 FlyBaseID:FBgn0031758 Length:337 Species:Drosophila melanogaster


Alignment Length:304 Identity:81/304 - (26%)
Similarity:130/304 - (42%) Gaps:55/304 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 AGIIGVTCVFPLDLVKTRLQNQ-----QIGPNGERMYNSMFDCFRKTYKAEGYFGMYRGSGVNIL 90
            |.|:|    :|.|:.|||:|.|     ::|...:  |..:........:.||...:|.|....:.
  Fly    50 AEIVG----YPFDMCKTRMQIQGEIASRVGQKAK--YRGLLATAMGIVREEGLLKLYGGISAMLF 108

  Fly    91 LITPEKAIKLTANDYFRHKLTT--KDGK--LPLTSQMVAGGLAGAFQIIVTTPMELLKIQMQDAG 151
            ..:....||:...||.|.|:..  :||:  |......::|.||||...::|.|.||:|||||..|
  Fly   109 RHSLFSGIKMLTYDYMREKMIVPDEDGRPQLSFLGSCISGVLAGATASVLTNPTELIKIQMQMEG 173

  Fly   152 RVAAAAKLAGKTVEKVSATQLASQLIKDKGIFGLYKG------------IGATGLRDV--TFSII 202
            :    .:|.|:.....:..|..:.:.:..|:.||:||            ||.....|.  .|.|.
  Fly   174 Q----RRLRGEPPRIHNVLQALTSIYRTGGVVGLWKGTVPNTWRSALVTIGDVSCYDFCKRFLIA 234

  Fly   203 YFPLFATLNDLGPRRNDGSGEAVFWCSFLAGLAAGSTAALAVNPFDVVKTRL--QAIKKADGEKE 265
            .|       ||...|.         ..|:|.:.||...|:...|.||||:|:  |...:......
  Fly   235 EF-------DLVDNRE---------VQFVAAMTAGVADAILSLPADVVKSRIMNQPTDEQGRGIH 283

  Fly   266 FKGISDCITKTLKHEGPTAFFKGGLCRMIVIAPLFGIAQTVYYL 309
            :||..||:::.::.||..|.:||.:...:.:.|    |..|:::
  Fly   284 YKGSLDCLSRLVREEGFLAMYKGFIPYWMRVGP----ASVVFWM 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC1NP_650134.1 PTZ00169 37..294 CDD:240302 75/281 (27%)
Ucp4BNP_608977.1 Mito_carr 32..129 CDD:395101 22/84 (26%)
Mito_carr 138..233 CDD:395101 28/98 (29%)
Mito_carr 246..331 CDD:395101 24/82 (29%)

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