DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC1 and Ucp4C

DIOPT Version :10

Sequence 1:NP_650134.1 Gene:GC1 / 41448 FlyBaseID:FBgn0260743 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_608976.1 Gene:Ucp4C / 33832 FlyBaseID:FBgn0031757 Length:335 Species:Drosophila melanogaster


Alignment Length:343 Identity:83/343 - (24%)
Similarity:141/343 - (41%) Gaps:65/343 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IATPLPQPQHQQFALLPKIINGGIAGIIGVTCVFPLDLVKTRLQ--NQQIGPNGERMYNSMFDCF 69
            :|.||....     |....:|..|...:..:||||||:.|||:|  .:|....|:.|     ..|
  Fly    27 VADPLTARN-----LFQLYVNTFIGANLAESCVFPLDVAKTRMQVDGEQAKKTGKAM-----PTF 81

  Fly    70 RKT----YKAEGYFGMYRGSGVNILLITPEKAIKLTANDYFRHKLTTKDGK--------LPLTSQ 122
            |.|    .:.||:..:|.|....:.......::::...|.||.....::.:        :.|...
  Fly    82 RATLTNMIRVEGFKSLYAGFSAMVTRNFIFNSLRVVLYDVFRRPFLYQNERNEEVLKIYMALGCS 146

  Fly   123 MVAGGLAGAFQIIVTTPMELLKIQMQDAGRVAAAAKLAGKTVEKVSATQLASQLIKDKGIFGLYK 187
            ..||.:|.|    :..|.:::|::||..||    .:..|..|...|..|....:.:..|:..::|
  Fly   147 FTAGCIAQA----LANPFDIVKVRMQTEGR----RRQLGYDVRVNSMVQAFVDIYRRGGLPSMWK 203

  Fly   188 GIGATGLR-------DVTFSIIYFPLFATLNDLG---PRRNDGSGEAVFWCSFLAGLAAGSTAAL 242
            |:|.:.:|       ||....|....|..|.||.   |.|            |::.:.||.||::
  Fly   204 GVGPSCMRACLMTTGDVGSYDISKRTFKRLLDLEEGLPLR------------FVSSMCAGLTASV 256

  Fly   243 AVNPFDVVKTRL--QAIKKADGEKEFKGISDCITKTLKHEGPTAFFKGGLCRMIVIAPLFGIAQT 305
            ...|.||:|:|:  |.:.::.....:|...||:.|.::.||....:||.:.....:.|.    ..
  Fly   257 LSTPADVIKSRMMNQPVDESGKNLYYKNSLDCVRKLVREEGVLTLYKGLMPTWFRLGPF----SV 317

  Fly   306 VYYLGVA-----EGLLGY 318
            :::|.|.     ||..|:
  Fly   318 LFWLSVEQLRQWEGQSGF 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC1NP_650134.1 PTZ00169 37..294 CDD:240302 71/282 (25%)
Ucp4CNP_608976.1 Mito_carr 49..124 CDD:395101 22/79 (28%)
Mito_carr 137..232 CDD:395101 24/102 (24%)
Mito_carr 237..329 CDD:395101 24/107 (22%)

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