DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC1 and slc25a12

DIOPT Version :10

Sequence 1:NP_650134.1 Gene:GC1 / 41448 FlyBaseID:FBgn0260743 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_997947.1 Gene:slc25a12 / 337675 ZFINID:ZDB-GENE-031006-11 Length:682 Species:Danio rerio


Alignment Length:288 Identity:123/288 - (42%)
Similarity:167/288 - (57%) Gaps:26/288 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 GGIAGIIGVTCVFPLDLVKTRLQNQQIGPN--GERMYNSMFDCFRKTYKAEGYFGMYRGSGVNIL 90
            |.|||..|.|.|:|:||||||:|||:...:  ||.||.:.|||.:|..:.||:||.|||....::
Zfish   335 GSIAGATGATAVYPIDLVKTRMQNQRSTGSFVGELMYKNSFDCAKKVLRYEGFFGFYRGLLPQLI 399

  Fly    91 LITPEKAIKLTANDYFRHKLTTKDGKLPLTSQMVAGGLAGAFQIIVTTPMELLKIQMQDAGRVAA 155
            .:.||||||||.||:.|.|.||.|..:||.::::|||.||..|:|.|.|:|::||::|.||.:..
Zfish   400 GVAPEKAIKLTVNDFVRDKFTTNDDTIPLAAEILAGGCAGGSQVIFTNPLEIVKIRLQVAGEITT 464

  Fly   156 AAKLAGKTVEKVSATQLASQLIKDKGIFGLYKGIGATGLRDVTFSIIYFPLF----ATLNDLGPR 216
            ..:::            |..:|:|.|.||||||..|..|||:.||.||||::    |.|.|    
Zfish   465 GPRVS------------ALSVIRDLGFFGLYKGTKACFLRDIPFSAIYFPVYAHTKALLAD---- 513

  Fly   217 RNDGSGEAVFWCSFLAGLAAGSTAALAVNPFDVVKTRLQAIKKADGEKEFKGISDCITKTLKHEG 281
             .||...|:...|  ||..||..||..|.|.||:|||||...:| |:..:.|:.||..|.:|.||
Zfish   514 -EDGRLGALQLLS--AGAIAGVPAASLVTPADVIKTRLQVAARA-GQTTYNGVIDCFRKIMKEEG 574

  Fly   282 PTAFFKGGLCRMIVIAPLFGIAQTVYYL 309
            ..|.:||...|:...:|.|.:....|.|
Zfish   575 FRALWKGAGARVFRSSPQFAVTLLTYEL 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC1NP_650134.1 PTZ00169 37..294 CDD:240302 114/262 (44%)
slc25a12NP_997947.1 EF-hand_7 14..81 CDD:463900
EFh_PEF 19..190 CDD:355382
EF-hand motif 19..49 CDD:320054
EF-hand motif 57..94 CDD:320054
EF-hand motif 95..126 CDD:320054
EF-hand motif 133..161 CDD:320054
EF-hand motif 163..190 CDD:320054
Mito_carr 329..422 CDD:395101 45/86 (52%)
Mito_carr 424..511 CDD:395101 38/98 (39%)
Mito_carr 516..608 CDD:395101 35/90 (39%)
Blue background indicates that the domain is not in the aligned region.

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