DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC1 and Slc25a22

DIOPT Version :10

Sequence 1:NP_650134.1 Gene:GC1 / 41448 FlyBaseID:FBgn0260743 Length:321 Species:Drosophila melanogaster
Sequence 2:XP_063120085.1 Gene:Slc25a22 / 309111 RGDID:1307826 Length:342 Species:Rattus norvegicus


Alignment Length:309 Identity:159/309 - (51%)
Similarity:197/309 - (63%) Gaps:51/309 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 QQFALLPKIINGGIAGIIGVTCVFPLDLVKTRLQNQQIGPNGERMYNSMFDCFRKTYKAEGYFGM 81
            :|.:|..|:|||||||:||||||||:||.||||||||   ||:|||.||.||..||.::||||||
  Rat     4 KQISLPAKLINGGIAGLIGVTCVFPIDLAKTRLQNQQ---NGQRMYASMSDCLIKTIRSEGYFGM 65

  Fly    82 YRGSGVNILLITPEKAIKLTANDYFRHKLTTKDG-KLPLTSQMVAGGLAGAFQIIVTTPMELLKI 145
            |||:.||:.|:||||||||.|||:|||:| :||| ||.|..:|:||..||..|:|||||||:|||
  Rat    66 YRGAAVNLTLVTPEKAIKLAANDFFRHQL-SKDGQKLTLPKEMLAGCGAGTCQVIVTTPMEMLKI 129

  Fly   146 QMQDAGRVAAAAKLAGKTVE-----------------KVSATQLASQLIKDKGIFGLYKGIGATG 193
            |:|||||:||..|:.....:                 :.:||||...|:::.||.|||||:|||.
  Rat   130 QLQDAGRIAAQRKMLAAQAQLATQGGGQPSVEAPAAPRPTATQLTRDLLRNHGIAGLYKGLGATL 194

  Fly   194 LRDVTFSIIYFPLFATLNDLGPRRNDGSGEAVFWCSFLAGLAAGSTAALAVNPFD---------- 248
            ||||.|||:||||||.||.||  |.....::.|:.|||||..|||.||:||||.|          
  Rat   195 LRDVPFSIVYFPLFANLNQLG--RPSSEEKSPFYVSFLAGCVAGSAAAVAVNPCDGQCLGLGPTM 257

  Fly   249 -----------------VVKTRLQAIKKADGEKEFKGISDCITKTLKHE 280
                             |||||||::::...|..:.|..||......||
  Rat   258 GVGGGAGTPLVTHMFLVVVKTRLQSLERGVNEDTYSGFLDCARWARSHE 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC1NP_650134.1 PTZ00169 37..294 CDD:240302 146/289 (51%)
Slc25a22XP_063120085.1 None

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