DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC1 and Slc25a47

DIOPT Version :10

Sequence 1:NP_650134.1 Gene:GC1 / 41448 FlyBaseID:FBgn0260743 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_001001509.1 Gene:Slc25a47 / 299316 RGDID:1303247 Length:310 Species:Rattus norvegicus


Alignment Length:333 Identity:87/333 - (26%)
Similarity:145/333 - (43%) Gaps:69/333 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 INGGIAGIIGVTCVFPLDLVKTRLQNQQIGPNGERMYNSMFDCFRKTYKAEGYFGMYRGSGVNIL 90
            :.|.|.|:.||...:|||.||.::|.       |..|.|::.|.|.||:.|..:|.|||..:.:.
  Rat     4 VAGAIGGVCGVAVGYPLDTVKVKIQT-------EAKYTSIWHCVRDTYRQERLWGFYRGLSLPVC 61

  Fly    91 LITPEKAIKLTANDY-------FRHKLT-TKDGKLPLTSQMVAGGLAGAFQIIVTTPMELLKIQM 147
            .::...::......:       ||:..| .|..|..:|   ::|..:|..::.:|:|.|:.|:::
  Rat    62 TVSLVSSVSFGTYHHCLAHICRFRYGSTDVKPTKADIT---LSGCASGLVRVFLTSPTEVAKVRL 123

  Fly   148 QDAGRVAAAAKLAGKTVEK---VSATQLASQL------------------------IKDKGIFGL 185
            |        .:...:|.::   .|.|.:|..|                        .:::|:.||
  Rat   124 Q--------TQAQSQTQQRRPSASWTSVAPALCPAPTACLEPRPKYSGPLHCLVTVAREEGLRGL 180

  Fly   186 YKGIGATGLRD----VTFSIIYFPLFATLNDLGPRRNDGSGEAVFWCSFLAGLAAGSTAALAVNP 246
            |||..|..||:    .|:.:.|..|...|...|..:.|..|..|      ||..||..|.....|
  Rat   181 YKGSSALLLREGHSFATYFLSYAVLSEWLTPAGQSQPDVLGVLV------AGGCAGVLAWAVATP 239

  Fly   247 FDVVKTRLQAIKKADGEKEFKGISDCITKTLKHEGPTAFFKG---GLCRMIVIAPLFGIAQTVYY 308
            .||:|:||||  ...|::.::|:..|:..:::.|||...|||   ..||...:..:..:|... .
  Rat   240 MDVIKSRLQA--DGQGQQRYRGLLHCVVTSVREEGPRVLFKGLALNCCRAFPVNMVVFVAYEA-V 301

  Fly   309 LGVAEGLL 316
            |.:.:|||
  Rat   302 LRLTQGLL 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC1NP_650134.1 PTZ00169 37..294 CDD:240302 77/298 (26%)
Slc25a47NP_001001509.1 Solcar 1 1..80 23/82 (28%)
Mito_carr 2..74 CDD:395101 23/76 (30%)
Solcar 2 93..208 26/125 (21%)
Mito_carr 100..210 CDD:395101 24/117 (21%)
Mito_carr 215..304 CDD:395101 29/97 (30%)
Solcar 3 217..304 29/95 (31%)

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