DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC1 and SLC25A6

DIOPT Version :10

Sequence 1:NP_650134.1 Gene:GC1 / 41448 FlyBaseID:FBgn0260743 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_001627.2 Gene:SLC25A6 / 293 HGNCID:10992 Length:298 Species:Homo sapiens


Alignment Length:284 Identity:70/284 - (24%)
Similarity:118/284 - (41%) Gaps:26/284 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 QQFALLPKIINGGIAGIIGVTCVFPLDLVKTRLQNQQIGPN--GERMYNSMFDCFRKTYKAEGYF 79
            |..:.....:.||||..|..|.|.|::.||..||.|.....  .::.|..:.||..:..|.:|..
Human     4 QAISFAKDFLAGGIAAAISKTAVAPIERVKLLLQVQHASKQIAADKQYKGIVDCIVRIPKEQGVL 68

  Fly    80 GMYRGSGVNILLITPEKAIKLTANDYFRHKLTTKDGKLPLTSQ--------MVAGGLAGAFQIIV 136
            ..:||:..|::...|.:|:.....|.::....   |.:...:|        :.:||.|||..:..
Human    69 SFWRGNLANVIRYFPTQALNFAFKDKYKQIFL---GGVDKHTQFWRYFAGNLASGGAAGATSLCF 130

  Fly   137 TTPMELLKIQMQDAGRVAAAAKLAGKTVEKVSATQLASQLIKDKGIFGLYKGIGATGLRDVTFSI 201
            ..|::..:.      |:||....:|...|.........::.|..||.|||:|...:....:.:..
Human   131 VYPLDFART------RLAADVGKSGTEREFRGLGDCLVKITKSDGIRGLYQGFSVSVQGIIIYRA 189

  Fly   202 IYFPLFATLNDLGPRRNDGSGEAVFWCSFLAGLAAGSTAALAVNPFDVVKTR--LQAIKKADGEK 264
            .||.::.|...:.|   |.....:. .|::......:.|.:...|||.|:.|  :|:.:|. .:.
Human   190 AYFGVYDTAKGMLP---DPKNTHIV-VSWMIAQTVTAVAGVVSYPFDTVRRRMMMQSGRKG-ADI 249

  Fly   265 EFKGISDCITKTLKHEGPTAFFKG 288
            .:.|..||..|..:.||..|||||
Human   250 MYTGTVDCWRKIFRDEGGKAFFKG 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC1NP_650134.1 PTZ00169 37..294 CDD:240302 64/264 (24%)
SLC25A6NP_001627.2 PTZ00169 3..298 CDD:240302 70/284 (25%)
Solcar 1 6..98 24/91 (26%)
Solcar 2 111..201 21/95 (22%)
Solcar 3 212..297 20/63 (32%)
Important for transport activity. /evidence=ECO:0000250|UniProtKB:P12235 235..240 1/4 (25%)
Nucleotide carrier signature motif. /evidence=ECO:0000250|UniProtKB:P02722 235..240 1/4 (25%)

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