DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC1 and slc25a47

DIOPT Version :10

Sequence 1:NP_650134.1 Gene:GC1 / 41448 FlyBaseID:FBgn0260743 Length:321 Species:Drosophila melanogaster
Sequence 2:XP_004917228.1 Gene:slc25a47 / 100496270 XenbaseID:XB-GENE-6041480 Length:293 Species:Xenopus tropicalis


Alignment Length:279 Identity:81/279 - (29%)
Similarity:131/279 - (46%) Gaps:37/279 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 INGGIAGIIGVTCVFPLDLVKTRLQNQQIGPNGERMYNSMFDCFRKTYKAEGYFGMYRGSGVNIL 90
            |.|.:.|..||...:|||.||.|:|.|       :.||.::.|.|.|||.|...|.::|..:.:.
 Frog     5 IAGALGGACGVMVGYPLDTVKVRIQTQ-------KNYNGIWHCVRSTYKMERVSGFFKGVSMPMS 62

  Fly    91 LITPEKAIKLTANDYFRHKL---------TT--KDGKLPLTSQMVAGGLAGAFQIIVTTPMELLK 144
            :::...:|..   ..:|:.|         ||  |..|..:   .::|..||..||:|::|.::.|
 Frog    63 MVSVSSSIVF---GVYRNVLRNLCKLKYGTTAVKPSKFDI---FLSGYAAGGAQILVSSPADMAK 121

  Fly   145 IQMQDAGRVAAAAKLAGKTVEKVSA-TQLASQLIKDKGIFGLYKGIGATGLRDVTFSIIYFPLFA 208
            :::|.......:...:..|..|.|. ......::|::|..|||||..|...||......||..:|
 Frog   122 VRLQTQMCPPNSTTCSLLTGPKYSGPINCLLTIVKEEGFLGLYKGSSALMFRDCHSFATYFLSYA 186

  Fly   209 TLND--LGPRRNDGSGEAVFWCSFLAGLAAGSTAALAVNPFDVVKTRLQAIKKADG--EKEFKGI 269
            .|.:  |...::......|.:....||:.|...|    .|.||:|:|||    .||  ::.::|:
 Frog   187 ILREWLLPFEQSHSELIGVLFAGGFAGVVAWGIA----TPMDVIKSRLQ----VDGVTKQRYRGV 243

  Fly   270 SDCITKTLKHEGPTAFFKG 288
            ..|||::::.||.|..|||
 Frog   244 IHCITESVRQEGITVLFKG 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC1NP_650134.1 PTZ00169 37..294 CDD:240302 76/268 (28%)
slc25a47XP_004917228.1 Mito_carr 1..84 CDD:395101 26/88 (30%)
Mito_carr 100..193 CDD:395101 26/92 (28%)
Mito_carr 198..286 CDD:395101 24/73 (33%)

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