DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC1 and slc25a36

DIOPT Version :10

Sequence 1:NP_650134.1 Gene:GC1 / 41448 FlyBaseID:FBgn0260743 Length:321 Species:Drosophila melanogaster
Sequence 2:XP_002941237.1 Gene:slc25a36 / 100493017 XenbaseID:XB-GENE-947525 Length:309 Species:Xenopus tropicalis


Alignment Length:308 Identity:74/308 - (24%)
Similarity:135/308 - (43%) Gaps:36/308 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 LPKIINGGIAGIIGVTCVFPLDLVKTRLQNQQI----------GPNG------ERMYNSMFDCFR 70
            |..:..||..|.:|.....||::||||||:..:          ..||      .|:......|.:
 Frog     7 LVHLFAGGCGGTVGAILTCPLEVVKTRLQSSSVTLYISEVHLNTVNGASVNRVARVSPGPLHCLK 71

  Fly    71 KTYKAEGYFGMYRGSGVNILLITPEKAIKLTANDYFRHKLTTKDGKLPLTSQMVAGGLAGAFQII 135
            ...:.||...::||.|.|::.:.|.:||...|....:.:|............|::.|.||...|.
 Frog    72 VILQKEGPRSLFRGLGPNLVGVAPSRAIYFAAYSSCKERLNHVFAADSTQVHMISAGAAGFTAIT 136

  Fly   136 VTTPMELLKIQMQDAGRVAAAAKLAGKTVEKVSATQLASQLIKDKGIFGLYKGIGATGLRDVTFS 200
            .|.|:.|:|.::|...|        .:...::||.:...::.|..|:.|.|:|:.|: ...::.:
 Frog   137 ATNPIWLIKTRLQLDAR--------NRGERRMSAFECIRKVYKTDGLKGFYRGMSAS-YAGISET 192

  Fly   201 IIYFPLFATL-NDLGPRRNDGSGEAVFWCSFLAGL----AAGSTAALAV-NPFDVVKTRLQAIKK 259
            :|:|.::.:: ..|..::.....|:|...|...||    |...|.|.:: .|.:||:|||    :
 Frog   193 VIHFVIYESIKRKLLEQKIADEDESVKEPSDFVGLMLAAATSKTCATSIAYPHEVVRTRL----R 253

  Fly   260 ADGEKEFKGISDCITKTLKHEGPTAFFKGGLCRMIVIAPLFGIAQTVY 307
            .:|.| ::.....::..:|.||..|.::|....::...|...|..:.|
 Frog   254 EEGTK-YRAFFQTLSLVVKEEGYGALYRGLTTHLVRQIPNTAIMMSTY 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC1NP_650134.1 PTZ00169 37..294 CDD:240302 66/278 (24%)
slc25a36XP_002941237.1 Mito_carr 2..115 CDD:395101 28/107 (26%)
Mito_carr 119..210 CDD:395101 22/99 (22%)
Mito_carr 220..309 CDD:395101 22/86 (26%)

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