DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC1 and slc25a18

DIOPT Version :10

Sequence 1:NP_650134.1 Gene:GC1 / 41448 FlyBaseID:FBgn0260743 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_001096428.1 Gene:slc25a18 / 100125036 XenbaseID:XB-GENE-956024 Length:304 Species:Xenopus tropicalis


Alignment Length:310 Identity:174/310 - (56%)
Similarity:227/310 - (73%) Gaps:18/310 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 QQFALLPKIINGGIAGIIGVTCVFPLDLVKTRLQNQQIGPNGERMYNSMFDCFRKTYKAEGYFGM 81
            ::.:|..|:|||||||::|||||||:||.||||||||    |..:|..||||..||.::||:|||
 Frog     3 EKISLPAKLINGGIAGLVGVTCVFPIDLAKTRLQNQQ----GSGIYRGMFDCLIKTVRSEGFFGM 63

  Fly    82 YRGSGVNILLITPEKAIKLTANDYFRHKLTTKDGK-LPLTSQMVAGGLAGAFQIIVTTPMELLKI 145
            |||:.||:.|:||||||||.|||:||: |..:||| |.|..:|:||..||..|::||:|||:|||
 Frog    64 YRGAAVNLTLVTPEKAIKLAANDFFRN-LLARDGKELTLLKEMLAGCGAGTCQVVVTSPMEMLKI 127

  Fly   146 QMQDAGRVAAAAKLAGKTV----EKVSATQLASQLIKDKGIFGLYKGIGATGLRDVTFSIIYFPL 206
            |:|||||:|.....|.:.:    ::.||..:|:.|::.:||.|:|||:|||.||||.||:|||||
 Frog   128 QLQDAGRLATQKAFAEEGLAAIPKRPSALLIATNLLRTQGISGVYKGLGATLLRDVPFSVIYFPL 192

  Fly   207 FATLNDLG---PRRNDGSGEAVFWCSFLAGLAAGSTAALAVNPFDVVKTRLQAIKKADGEKEFKG 268
            ||.||.||   ||.     .|.|:.|||||..|||.||:||.|.||:|||:|.::|..||:.:.|
 Frog   193 FANLNKLGQKSPRE-----RAPFYHSFLAGCVAGSVAAVAVTPLDVLKTRIQTLQKGIGEETYNG 252

  Fly   269 ISDCITKTLKHEGPTAFFKGGLCRMIVIAPLFGIAQTVYYLGVAEGLLGY 318
            |.||..||.::|||:||.||..||.:||||||||||.||::|:.|.:|||
 Frog   253 ILDCARKTWRNEGPSAFMKGAGCRALVIAPLFGIAQVVYFIGIGEYILGY 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC1NP_650134.1 PTZ00169 37..294 CDD:240302 146/264 (55%)
slc25a18NP_001096428.1 PTZ00169 1..273 CDD:240302 154/279 (55%)
Mito_carr 3..96 CDD:395101 59/97 (61%)

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