DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC1 and slc25a22b

DIOPT Version :9

Sequence 1:NP_001262490.1 Gene:GC1 / 41448 FlyBaseID:FBgn0260743 Length:321 Species:Drosophila melanogaster
Sequence 2:XP_009301224.1 Gene:slc25a22b / 100005520 ZFINID:ZDB-GENE-110408-66 Length:318 Species:Danio rerio


Alignment Length:312 Identity:185/312 - (59%)
Similarity:228/312 - (73%) Gaps:19/312 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 QFALLPKIINGGIAGIIGVTCVFPLDLVKTRLQNQQIGPNGERMYNSMFDCFRKTYKAEGYFGMY 82
            |.:|..|:|||||||:||||||||:||.||||||||   ||.|:|.:|.||..||.::||:.|||
Zfish     5 QISLPAKLINGGIAGLIGVTCVFPIDLAKTRLQNQQ---NGSRVYTNMSDCLMKTVRSEGFTGMY 66

  Fly    83 RGSGVNILLITPEKAIKLTANDYFRHKLTTKDG-KLPLTSQMVAGGLAGAFQIIVTTPMELLKIQ 146
            ||:.||:.|:||||||||.|||:||.:| :||| ||.|..:|:||..||..|:|:|||||:||||
Zfish    67 RGAAVNLALVTPEKAIKLVANDFFRQQL-SKDGEKLTLVREMLAGCGAGTCQVIITTPMEMLKIQ 130

  Fly   147 MQDAGRVAAAAKLAG----------KTV--EKVSATQLASQLIKDKGIFGLYKGIGATGLRDVTF 199
            :|||||:.|..|:.|          :||  :..||.||:..|:|.|||.|||.|:|||.||||.|
Zfish   131 LQDAGRLEAQRKMIGPDAVRGRAKDRTVHLKSPSALQLSRNLLKHKGIAGLYTGLGATLLRDVPF 195

  Fly   200 SIIYFPLFATLNDLGPRRNDGSGEAVFWCSFLAGLAAGSTAALAVNPFDVVKTRLQAIKKADGEK 264
            |||||||||.||.||.|..|||  |.|:.|||:|..||..||:||||.||:|||||::.:...|.
Zfish   196 SIIYFPLFANLNSLGRRNADGS--APFYISFLSGCFAGCAAAVAVNPVDVIKTRLQSLSRGHHED 258

  Fly   265 EFKGISDCITKTLKHEGPTAFFKGGLCRMIVIAPLFGIAQTVYYLGVAEGLL 316
            .:.|:.|||:|.|:||||:||.||..||.:||||||||.|.||:|||.|.:|
Zfish   259 TYSGVRDCISKILRHEGPSAFLKGSYCRALVIAPLFGIVQVVYFLGVGEFVL 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC1NP_001262490.1 Mito_carr 36..113 CDD:278578 49/76 (64%)
Mito_carr 115..213 CDD:278578 62/110 (56%)
Mito_carr 226..307 CDD:278578 46/80 (58%)
slc25a22bXP_009301224.1 PTZ00169 3..284 CDD:240302 167/284 (59%)
Mito_carr 4..98 CDD:278578 62/96 (65%)
Mito_carr 99..203 CDD:278578 56/103 (54%)
Mito_carr 216..315 CDD:278578 56/97 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 108 1.000 Domainoid score I6357
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 351 1.000 Inparanoid score I2237
OMA 1 1.010 - - QHG53612
OrthoDB 1 1.010 - - D458796at33208
OrthoFinder 1 1.000 - - FOG0002230
OrthoInspector 1 1.000 - - mtm6363
orthoMCL 1 0.900 - - OOG6_104895
Panther 1 1.100 - - O PTHR45678
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4126
SonicParanoid 1 1.000 - - X982
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1212.010

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