DRSC/TRiP Functional Genomics Resources

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Protein Alignment aurA and Rps6ka6

DIOPT Version :10

Sequence 1:NP_476749.1 Gene:aurA / 41446 FlyBaseID:FBgn0000147 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_001178650.1 Gene:Rps6ka6 / 317203 RGDID:1560817 Length:860 Species:Rattus norvegicus


Alignment Length:427 Identity:128/427 - (29%)
Similarity:201/427 - (47%) Gaps:69/427 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 NMQKNL-----LLGKKPNSENMAPASKPLPGSSGALIRKPGLGGSNSIASSEGNNFQKPMVPS-- 85
            |...||     ..|.:..|.:...|..|:.    .|:|.|.|..| ::...|..::::...|:  
  Rat    17 NSSLNLFCCFPFFGCRRQSRSRQRAGTPVV----PLLRYPPLARS-AVTQRESWSYEEDHEPAQQ 76

  Fly    86 -----VKKTTSEF-----AAPAPVAPIKKP----------ESLSKQKP-------TAASSESSKE 123
                 |..|:|.|     ||..|.||::.|          .|.|..:|       |||......|
  Rat    77 AGCMLVLGTSSFFSSVPEAAMLPFAPVEDPWDEEMEVFGSGSTSSSEPQIVFTMKTAAMVIRQHE 141

  Fly   124 LGAASSSAEKEKTKTETQP---------------QKPKKTWELNN---FDIGRLLGRGKFGNVYL 170
            ....:.....::...|.:|               |..|:.:|..:   ||:.::||:|.||.|:|
  Rat   142 HKEVNDLKMVDEPMDEGEPVFCRREDLVKEIPITQHVKEGYEKADPAQFDLLKVLGQGSFGKVFL 206

  Fly   171 AREK---ESQFVVALKVLFKRQIGESNVEHQVRREIE--IQSHLRHPHILRLYAYFHDDVRIYLI 230
            .|:|   ::..:.|:|||.|..:   .|..:||.::|  |...:.||.|::|:..|..:.::|||
  Rat   207 VRKKTGPDAGQLYAMKVLRKASL---KVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLI 268

  Fly   231 LEYAPQGTLFNALQAQPMKRFDERQSATYIQALCSALLYLHERDIIHRDIKPENLLLGHKGVLKI 295
            |::...|.:|..|..:.:  |.|.....|:..|..||.:||...|::||:||||:||...|.:|:
  Rat   269 LDFLRGGDVFTRLSKEVL--FTEEDVKFYLAELALALDHLHRLGIVYRDLKPENILLDEIGHIKL 331

  Fly   296 ADFGWSVH--EPNSMRMTLCGTVDYLPPEMVQGKPHTKNVDLWSLGVLCFELLVGHAPFYSKNYD 358
            .|||.|..  :......:.||||:|:.||:|..:.|:::.|.||.|||.||:|.|..||..|:.:
  Rat   332 TDFGLSKESVDQEKKAYSFCGTVEYMAPEVVNRRGHSQSADWWSYGVLMFEMLTGTLPFQGKDRN 396

  Fly   359 ETYKKILKVDYKLPEHISKAASHLISKLLVLNPQHRL 395
            ||...|||....:|:.:|..|..|:..|...||.:||
  Rat   397 ETMNMILKAKLGMPQFLSAEAQSLLRMLFKRNPANRL 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aurANP_476749.1 STKc_Aurora 153..407 CDD:270909 92/253 (36%)
Rps6ka6NP_001178650.1 STKc_RSK_N 194..508 CDD:270734 90/245 (37%)
STKc_RSK_C 543..829 CDD:270993
Blue background indicates that the domain is not in the aligned region.

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