DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3281 and MGC146893

DIOPT Version :10

Sequence 1:NP_650132.1 Gene:CG3281 / 41445 FlyBaseID:FBgn0260741 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_001072248.1 Gene:MGC146893 / 779697 -ID:- Length:180 Species:Xenopus tropicalis


Alignment Length:156 Identity:62/156 - (39%)
Similarity:84/156 - (53%) Gaps:11/156 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   293 RRDCPHCGLSFPV-SSLTIHIRRHTGDNPYKCDQCEKAFPRSQDLSLHMRQHTGERPSECKICSK 356
            :.:||.||..|.. :.|.||.|.|||:.|:.|.:|.|.|.|.|||:.|...||||:|..|..|.|
 Frog    15 QHECPECGKRFSYKNKLIIHYRVHTGEKPFMCTECGKKFRRKQDLTEHQLIHTGEKPFMCTECDK 79

  Fly   357 KFISQNKLARHMRLHTGQRPYSCKMCSKSFVQSNDLKIHMRRHTGERPYQCGVCGESFV----CG 417
            :|..::.|..|.|:|||.:|:.|..|.|||...:.::.|.|.||||:|:.|..||:.|.    ..
 Frog    80 QFNKRSNLLSHQRIHTGVKPFVCMECGKSFSDKSSIQNHQRIHTGEKPFSCTECGKRFTTKSQLS 144

  Fly   418 SHLNIHRNRKGHLIA------VIPGN 437
            ||..:|...|....|      |:.||
 Frog   145 SHYMVHTGEKPFACADCGKSFVLKGN 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3281NP_650132.1 zf-AD 15..91 CDD:214871
C2H2 Zn finger 205..226 CDD:275368
C2H2 Zn finger 249..266 CDD:275368
COG5048 <294..>391 CDD:227381 43/97 (44%)
C2H2 Zn finger 296..315 CDD:275368 9/19 (47%)
C2H2 Zn finger 323..343 CDD:275368 9/19 (47%)
C2H2 Zn finger 351..371 CDD:275368 7/19 (37%)
zf-H2C2_2 364..388 CDD:463886 12/23 (52%)
C2H2 Zn finger 379..399 CDD:275368 7/19 (37%)
zf-H2C2_2 391..416 CDD:463886 11/28 (39%)
C2H2 Zn finger 407..424 CDD:275368 6/20 (30%)
MGC146893NP_001072248.1 COG5048 <5..166 CDD:227381 59/150 (39%)
C2H2 Zn finger 18..38 CDD:275368 9/19 (47%)
C2H2 Zn finger 46..66 CDD:275368 9/19 (47%)
C2H2 Zn finger 74..94 CDD:275368 7/19 (37%)
SUF4-like 98..>150 CDD:411020 19/51 (37%)
C2H2 Zn finger 102..123 CDD:411020 7/20 (35%)
C2H2 Zn finger 102..122 CDD:275368 7/19 (37%)
C2H2 Zn finger 130..150 CDD:411020 6/19 (32%)
C2H2 Zn finger 130..150 CDD:275368 6/19 (32%)
C2H2 Zn finger 158..179 CDD:275368 4/13 (31%)
Blue background indicates that the domain is not in the aligned region.

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