DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3281 and Zfp248

DIOPT Version :10

Sequence 1:NP_650132.1 Gene:CG3281 / 41445 FlyBaseID:FBgn0260741 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_082611.1 Gene:Zfp248 / 72720 MGIID:1919970 Length:576 Species:Mus musculus


Alignment Length:506 Identity:135/506 - (26%)
Similarity:205/506 - (40%) Gaps:134/506 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 MHLCQNCARRLIGAYEFIVEVENAHETLQNLFEQQEVAAKP------DEVHVDVVELIDQD---D 117
            :.:|.:|...|......|:..:|......|.|   .:..||      :::.|. ::..|.|   |
Mouse   134 LKVCDSCEMNLKNVSAVIISKKNYSRKKLNEF---NIHKKPLPDSRREKIPVG-IKSCDYDGERD 194

  Fly   118 VVSMAQYLSTSFAEQHVEMEEK---YGDQD--CSAFTSDVGEEPLYASEDRDDEPEDSFQLKPRP 177
            .|.:.:.|:...:.|..|..|.   :.::.  |::..|.:| |.||...:......||.:|    
Mouse   195 GVRLCRDLARPVSHQPFEYNETGQGFCEEVALCTSQNSQLG-ETLYKHTECGRTFVDSLKL---- 254

  Fly   178 DEIENRELSRPSQLGSRLNHSANFIYKCAVCPRVF----------AKSESLTRHFSQAHKLTADV 232
                  .:|:.::|.:.|       ::|::|.:.|          |.|.|.....::..||..|.
Mouse   255 ------SVSQKTRLHTEL-------HECSICRKSFYVDLQFGHHTALSGSSPYERNEYEKLFCDG 306

  Fly   233 AAM---------------KLANESCGTGLLTCEHCPRTFKRQDTLRRHMQAFHPDAIAL--EPEE 280
            .|.               |::|.:.|.        |..||.|             .|.:  :|.|
Mouse   307 TAFIVHQEAYTRKIAQEYKVSNRTWGK--------PALFKHQ-------------IIQMGGKPYE 350

  Fly   281 TTDNSARKRIAKRR---------------DCPHCGLSF-PVSSLTIHIRRHTGDNPYKCDQCEKA 329
            ..:|  ||..:|:.               :|..||..| ..|:||.|.|.|||:.||:|.:|.||
Mouse   351 YYEN--RKNFSKKSHPTQPRRPHVGEKTFECGECGKMFWEKSNLTQHQRTHTGEKPYECTECGKA 413

  Fly   330 FPRSQDLSLHMRQHTGERPSECKICSKKFISQNKLARHMRLHTGQRPYSCKMCSKSFVQSNDLKI 394
            |.:...|:.|.|.||||:|.|||.|.|.|..::.|..|.|.|||::||.|..|.|||...:.|.:
Mouse   414 FCQKPHLTNHQRTHTGEKPYECKQCGKTFCVKSNLTEHQRTHTGEKPYECNACRKSFCHRSALTV 478

  Fly   395 HMRRHTGERPYQCGVCGESFVCGSHLNIH-RNRKGHLIAVIPGNEVEANFAADPYVNARVNQRRS 458
            |.|.||||:|:.|..||:||...|:|.:| |...|.                .||   :.|:...
Mouse   479 HQRTHTGEKPFICSECGKSFCVKSNLIVHQRTHTGE----------------KPY---KCNECGK 524

  Fly   459 EDIERMRLQRIPENQLQQRLENLPKPDVPAMCYKCGVCEQKFKSGALLTVH 509
            ...|:..|.:      .||.....||      |:|.||.:.|...::||.|
Mouse   525 TFCEKSALTK------HQRTHTGEKP------YECHVCGKTFSQRSVLTKH 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3281NP_650132.1 zf-AD 15..91 CDD:214871 5/28 (18%)
C2H2 Zn finger 205..226 CDD:275368 6/30 (20%)
C2H2 Zn finger 249..266 CDD:275368 4/16 (25%)
COG5048 <294..>391 CDD:227381 46/112 (41%)
C2H2 Zn finger 296..315 CDD:275368 9/19 (47%)
C2H2 Zn finger 323..343 CDD:275368 8/19 (42%)
C2H2 Zn finger 351..371 CDD:275368 8/19 (42%)
zf-H2C2_2 364..388 CDD:463886 13/23 (57%)
C2H2 Zn finger 379..399 CDD:275368 8/19 (42%)
zf-H2C2_2 391..416 CDD:463886 13/24 (54%)
C2H2 Zn finger 407..424 CDD:275368 8/17 (47%)
Zfp248NP_082611.1 KRAB 8..68 CDD:214630
C2H2 Zn finger 379..399 CDD:275368 9/19 (47%)
COG5048 403..>469 CDD:227381 31/65 (48%)
C2H2 Zn finger 407..427 CDD:275368 8/19 (42%)
C2H2 Zn finger 435..455 CDD:275368 8/19 (42%)
COG5048 459..>520 CDD:227381 27/79 (34%)
C2H2 Zn finger 463..483 CDD:275368 8/19 (42%)
C2H2 Zn finger 491..511 CDD:275368 9/19 (47%)
zf-H2C2_2 503..526 CDD:463886 7/41 (17%)
C2H2 Zn finger 519..539 CDD:275368 5/25 (20%)
zf-H2C2_2 531..556 CDD:463886 10/36 (28%)
C2H2 Zn finger 547..567 CDD:275368 7/17 (41%)
Blue background indicates that the domain is not in the aligned region.

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