DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3281 and ZNF248

DIOPT Version :10

Sequence 1:NP_650132.1 Gene:CG3281 / 41445 FlyBaseID:FBgn0260741 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_066383.1 Gene:ZNF248 / 57209 HGNCID:13041 Length:579 Species:Homo sapiens


Alignment Length:566 Identity:154/566 - (27%)
Similarity:219/566 - (38%) Gaps:160/566 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 HDEIKYN-DLKLE---------LWQLL------------EAVSKLKWTWTDP----NLPMHLCQN 67
            |.|.|:. |..||         .|:||            :..||.....|||    |.|..:|.:
Human    78 HPERKWKVDDVLESSQENEDDHFWELLFHNNKTVSVENGDRGSKTFNLGTDPVSLRNYPYKICDS 142

  Fly    68 CARRLIGAYEFIVEVENAHETLQNLFEQQEVAAKPDEVHVDVVELID-----------------Q 115
            |...|......|:..:|...            .||||.:|....|:|                 :
Human   143 CEMNLKNISGLIISKKNCSR------------KKPDEFNVCEKLLLDIRHEKIPIGEKSYKYDQK 195

  Fly   116 DDVVSMAQYLS-TSFAEQHVEMEEKYGDQDCSAF----TSDVGEEPLYASEDRDDEPEDSFQLKP 175
            .:.::..|.|| .||.:.....:...|..|.:||    .|.:||     :..:.:|...:|    
Human   196 RNAINYHQDLSQPSFGQSFEYSKNGQGFHDEAAFFTNKRSQIGE-----TVCKYNECGRTF---- 251

  Fly   176 RPDEIENRELS---RPSQLGSRLNHSANFIYKCAVCPRVFAKSESLTRHFSQAHKLTADVAAMKL 237
                ||:.:|:   ||        |.....|.|::|    .||..:...|.....||.|      
Human   252 ----IESLKLNISQRP--------HLEMEPYGCSIC----GKSFCMNLRFGHQRALTKD------ 294

  Fly   238 AN--ESCGTGLLTCEHCP-------------RTFKRQD------TLRRHMQAFHPDAIALEPEET 281
             |  |....|.:.|::..             |.:|..|      .|.:| |..|....:.:..|.
Human   295 -NPYEYNEYGEIFCDNSAFIIHQGAYTRKILREYKVSDKTWEKSALLKH-QIVHMGGKSYDYNEN 357

  Fly   282 TDNSARK------RIA----KRRDCPHCGLSF-PVSSLTIHIRRHTGDNPYKCDQCEKAFPRSQD 335
            ..|.::|      |.|    |..:|..||.:| ..|:||.|.|.|||:.||:|.:|.|||.:...
Human   358 GSNFSKKSHLTQLRRAHTGEKTFECGECGKTFWEKSNLTQHQRTHTGEKPYECTECGKAFCQKPH 422

  Fly   336 LSLHMRQHTGERPSECKICSKKFISQNKLARHMRLHTGQRPYSCKMCSKSFVQSNDLKIHMRRHT 400
            |:.|.|.||||:|.|||.|.|.|..::.|..|.|.|||::||.|..|.|||...:.|.:|.|.||
Human   423 LTNHQRTHTGEKPYECKQCGKTFCVKSNLTEHQRTHTGEKPYECNACGKSFCHRSALTVHQRTHT 487

  Fly   401 GERPYQCGVCGESFVCGSHLNIH-RNRKGHLIAVIPGNEVEANFAADPYVNARVNQRRSEDIERM 464
            ||:|:.|..||:||...|:|.:| |...|.                .||   :.|:......|:.
Human   488 GEKPFICNECGKSFCVKSNLIVHQRTHTGE----------------KPY---KCNECGKTFCEKS 533

  Fly   465 RLQRIPENQLQQRLENLPKPDVPAMCYKCGVCEQKFKSGALLTVHR 510
            .|.:      .||.....||      |:|..|.:.|...::||.|:
Human   534 ALTK------HQRTHTGEKP------YECNACGKTFSQRSVLTKHQ 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3281NP_650132.1 zf-AD 15..91 CDD:214871 21/87 (24%)
C2H2 Zn finger 205..226 CDD:275368 5/20 (25%)
C2H2 Zn finger 249..266 CDD:275368 5/35 (14%)
COG5048 <294..>391 CDD:227381 46/97 (47%)
C2H2 Zn finger 296..315 CDD:275368 9/19 (47%)
C2H2 Zn finger 323..343 CDD:275368 8/19 (42%)
C2H2 Zn finger 351..371 CDD:275368 8/19 (42%)
zf-H2C2_2 364..388 CDD:463886 13/23 (57%)
C2H2 Zn finger 379..399 CDD:275368 8/19 (42%)
zf-H2C2_2 391..416 CDD:463886 13/24 (54%)
C2H2 Zn finger 407..424 CDD:275368 8/17 (47%)
ZNF248NP_066383.1 KRAB 8..68 CDD:214630
C2H2 Zn finger 220..236 CDD:275368 4/15 (27%)
C2H2 Zn finger 244..264 CDD:275368 7/35 (20%)
C2H2 Zn finger 358..374 CDD:275368 3/15 (20%)
C2H2 Zn finger 382..402 CDD:275368 9/19 (47%)
COG5048 406..>472 CDD:227381 31/65 (48%)
C2H2 Zn finger 410..430 CDD:275368 8/19 (42%)
C2H2 Zn finger 438..458 CDD:275368 8/19 (42%)
COG5048 462..>523 CDD:227381 27/79 (34%)
C2H2 Zn finger 466..486 CDD:275368 8/19 (42%)
C2H2 Zn finger 494..514 CDD:275368 9/19 (47%)
zf-H2C2_2 506..529 CDD:463886 7/41 (17%)
C2H2 Zn finger 522..542 CDD:275368 5/25 (20%)
zf-H2C2_2 534..559 CDD:463886 9/36 (25%)
C2H2 Zn finger 550..570 CDD:275368 6/18 (33%)
Blue background indicates that the domain is not in the aligned region.

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