DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3281 and e4f1

DIOPT Version :9

Sequence 1:NP_650132.1 Gene:CG3281 / 41445 FlyBaseID:FBgn0260741 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_001020684.1 Gene:e4f1 / 561158 ZFINID:ZDB-GENE-050913-103 Length:719 Species:Danio rerio


Alignment Length:597 Identity:116/597 - (19%)
Similarity:182/597 - (30%) Gaps:232/597 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 ETHETNLYVHDEIKYNDLKLELWQLLEAVSKLKWTWTDPNLPMHLCQNCARRLIGAYEFIVEVEN 84
            |.:.|...|.|:.::::           :..::.|..|.:..:|.|..|.........||     
Zfish     4 ENNNTAATVTDQTEHSN-----------IITIQTTLGDEDEDIHKCGKCLAEFSALDAFI----- 52

  Fly    85 AHETLQNLFEQQEVAAKPDEVHVDVVELIDQDDVVSMAQYLSTSFAEQHVEMEEKYGDQDCSAFT 149
            .|:..::....|:                .|.:||          ..:.|.:|.:..:.:||:  
Zfish    53 QHKLSRSCKRTQD----------------PQTNVV----------PNEGVSVEVRSSENECSS-- 89

  Fly   150 SDVGEEPLYASEDRDDEPEDSFQLKPRPDEIENRELSRPSQLGSRLNHSANFIYKCAVCPRVFAK 214
                :|...|:.::.|....|.. |.|.......|.|.||::..:||....::  |.:|.:.|..
Zfish    90 ----DETATANGEKQDAKVASGD-KKRSRSTSEDESSSPSKVVWKLNTEGRYV--CDICAKTFKT 147

  Fly   215 SESLTRH-FSQAHKLTADVAAMKLANESCGTGLLT------------------CEHCPRTFKRQD 260
            :..|..| |:.:.:       .....|.|.|...|                  |..|...|:...
Zfish   148 TNILRTHMFTHSDQ-------KNFVCEMCETAFRTKGSLIRHKRRHTDERPYRCNQCGLAFRESG 205

  Fly   261 TLRRHMQAFHP------------------------------------------------------ 271
            .|.||:::..|                                                      
Zfish   206 ALTRHLKSLTPCTEKIRYSQCKEILVSKDGIRKEVQPSSPEPEKEQIPVVRVVEAGQEIIQIEVV 270

  Fly   272 ----------------------------DAIALEPE----------------------------- 279
                                        ..||||.|                             
Zfish   271 EEVQQVASQPQTATVVEADNLICQAIINSGIALETEATEAAGQVEAQSPKAVLGAPETETRITEI 335

  Fly   280 -----------ETTDNSARKRI----AKRRDCPHCGLSF-PVSSLTIHIRRHTGDNPYKCDQCEK 328
                       |.|.:|:.|.:    :|...||||...| .::.|.:|::.|.|..|:||..|:|
Zfish   336 QVTEECVETLAEETQDSSVKEVEPVQSKLYKCPHCERMFKTLNYLRVHVKGHVGYKPFKCLTCQK 400

  Fly   329 AFPRSQDLSLHMRQHTGERPSECKICSKKFISQNKLARHMRLHTGQRPYSCKMCSKSFVQSNDLK 393
            .|.....|..||..|..||..:|..|.|:|.:...:..|||.|:.:|||.|..|.||:...|.|:
Zfish   401 EFLTGYVLKKHMETHVSERRYKCGECGKQFKAIGHVREHMRAHSDERPYHCSFCDKSYKTKNALQ 465

  Fly   394 I----------------------------HMRRHTGERPYQCGVCGESFVCGSHLNIHRNRKGHL 430
            :                            |:|.||||:|::|..||..|.....||.|...||..
Zfish   466 VHHRTHADDKPYVCQHCSRGFREKSALVRHIRHHTGEKPFKCSKCGRGFAEHGTLNRHLRAKGGC 530

  Fly   431 IAVIPGNEVEAN 442
            .|.:...|...|
Zfish   531 FAQLKDCEHVVN 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3281NP_650132.1 zf-AD 14..92 CDD:285071 12/71 (17%)
C2H2 Zn finger 205..226 CDD:275368 6/21 (29%)
C2H2 Zn finger 249..266 CDD:275368 5/16 (31%)
COG5048 <294..>391 CDD:227381 36/97 (37%)
C2H2 Zn finger 296..315 CDD:275368 7/19 (37%)
zf-H2C2_2 307..330 CDD:290200 9/22 (41%)
C2H2 Zn finger 323..343 CDD:275368 7/19 (37%)
zf-H2C2_2 335..358 CDD:290200 9/22 (41%)
C2H2 Zn finger 351..371 CDD:275368 7/19 (37%)
zf-H2C2_2 364..388 CDD:290200 11/23 (48%)
C2H2 Zn finger 379..399 CDD:275368 8/47 (17%)
zf-H2C2_2 391..416 CDD:290200 12/52 (23%)
C2H2 Zn finger 407..424 CDD:275368 6/16 (38%)
e4f1NP_001020684.1 Required for ubiquitin ligase activity. /evidence=ECO:0000250 20..63 8/58 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 59..125 17/98 (17%)
Mediates dimerization and DNA-binding. /evidence=ECO:0000250 128..207 15/87 (17%)
C2H2 Zn finger 138..158 CDD:275368 6/19 (32%)
zf-C2H2 164..186 CDD:278523 4/21 (19%)
C2H2 Zn finger 166..186 CDD:275368 4/19 (21%)
zf-H2C2_2 178..201 CDD:290200 2/22 (9%)
C2H2 Zn finger 194..212 CDD:275368 6/17 (35%)
C2H2 Zn finger 367..387 CDD:275368 7/19 (37%)
C2H2 Zn finger 395..415 CDD:275368 7/19 (37%)
zf-H2C2_2 408..431 CDD:290200 9/22 (41%)
C2H2 Zn finger 423..443 CDD:275368 7/19 (37%)
zf-H2C2_2 435..460 CDD:290200 11/24 (46%)
C2H2 Zn finger 451..471 CDD:275368 6/19 (32%)
C2H2 Zn finger 479..499 CDD:275368 2/19 (11%)
zf-H2C2_2 491..515 CDD:290200 10/23 (43%)
C2H2 Zn finger 507..525 CDD:275368 7/17 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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