DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3281 and CG4424

DIOPT Version :10

Sequence 1:NP_650132.1 Gene:CG3281 / 41445 FlyBaseID:FBgn0260741 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster


Alignment Length:434 Identity:103/434 - (23%)
Similarity:169/434 - (38%) Gaps:119/434 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EIHVNISSQTCRVCL---ETHETNLY--VHDEIKYNDLKLELWQLLEAVS--KLKWTWTDPNLPM 62
            ||.:|:.: .||.||   |.|..:::  ..|.:...   :.|...:|::|  :::.|..:..||.
  Fly     2 EIRLNMMT-LCRTCLQDGEAHMVSIFQTADDRLPGG---VSLCDKIESLSGIQIRATAKEEVLPT 62

  Fly    63 HLCQNCARRLIGAYEFIVEVENAHETLQNLFEQQEVAAKPDEVHVDVVELIDQDDVVSMAQYLST 127
            .:|..|...|..|::|....:.::|.|:...               :.:.::|..|..:.|....
  Fly    63 RICLRCKAFLTLAHKFRQICQRSNEFLREYV---------------IKDAVEQGVVKEVVQQTRP 112

  Fly   128 SFAEQHVEMEEKYGDQDCSAFTSDVGEEPLYASEDRDDEPEDSFQLKPRPDEIENRELSRPSQLG 192
            | ....:|.|:....:|      :|.||.::::||..:|.......|.||.              
  Fly   113 S-TPPPIETEQLEPPED------EVLEEGVWSTEDPIEETPHGPAEKERPT-------------- 156

  Fly   193 SRLNHSANFIYKCAVCPRVFAKSESLTRHFSQAHKLTADVAAMKLANESCGTGLLTCEHCPRTFK 257
                                                                 :||.|..|    
  Fly   157 -----------------------------------------------------VLTVEMLP---- 164

  Fly   258 RQDTLRRHMQAFHPDAIALEPEETTDNSARKRIAKRRDCPHCGLSFP-VSSLTIHIRRHTGDNPY 321
                      |.:|...:..|....  .|.|  .|...|..||..:| .|:|..|:|||..:.||
  Fly   165 ----------APYPPPASTPPPAPA--GAVK--GKLHVCAICGNGYPRKSTLDTHMRRHNDERPY 215

  Fly   322 KCDQCEKAFPRSQDLSLHMRQHTGERPSECKICSKKFISQNKLARHMRLHTGQRPYSCKMCSKSF 386
            :|:.|.|:|..:..|..|:|||||.:|..|:.|.:.|..:..|.:|.|.|..:|||:||.|.|.|
  Fly   216 ECEICHKSFHVNYQLKRHIRQHTGAKPYTCQYCQRNFADRTSLVKHERTHRNERPYACKTCGKKF 280

  Fly   387 VQSNDLKIHMRRHTGERPYQCGVCGESFVCGSHLNIHRNRKGHL 430
            ..::.||:|.:.||||:|:.|.:|.:||....:|..|...:.|:
  Fly   281 TYASVLKMHYKTHTGEKPHICQLCNKSFARIHNLVAHLQTQQHI 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3281NP_650132.1 zf-AD 15..91 CDD:214871 20/82 (24%)
C2H2 Zn finger 205..226 CDD:275368 0/20 (0%)
C2H2 Zn finger 249..266 CDD:275368 2/16 (13%)
COG5048 <294..>391 CDD:227381 39/97 (40%)
C2H2 Zn finger 296..315 CDD:275368 8/19 (42%)
C2H2 Zn finger 323..343 CDD:275368 7/19 (37%)
C2H2 Zn finger 351..371 CDD:275368 6/19 (32%)
zf-H2C2_2 364..388 CDD:463886 12/23 (52%)
C2H2 Zn finger 379..399 CDD:275368 8/19 (42%)
zf-H2C2_2 391..416 CDD:463886 12/24 (50%)
C2H2 Zn finger 407..424 CDD:275368 5/16 (31%)
CG4424NP_650859.3 zf-AD 10..92 CDD:462262 20/84 (24%)
C2H2 Zn finger 189..209 CDD:275368 8/19 (42%)
COG5048 210..>345 CDD:227381 44/115 (38%)
C2H2 Zn finger 217..237 CDD:275368 7/19 (37%)
C2H2 Zn finger 245..265 CDD:275368 6/19 (32%)
C2H2 Zn finger 273..293 CDD:275368 8/19 (42%)
C2H2 Zn finger 301..320 CDD:275368 6/18 (33%)

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