DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3281 and CG7987

DIOPT Version :10

Sequence 1:NP_650132.1 Gene:CG3281 / 41445 FlyBaseID:FBgn0260741 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_650375.1 Gene:CG7987 / 41768 FlyBaseID:FBgn0038244 Length:1283 Species:Drosophila melanogaster


Alignment Length:628 Identity:129/628 - (20%)
Similarity:207/628 - (32%) Gaps:209/628 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 HLCQNCARR------LIGAYEFIVEVENA-------------------HETLQNLFE-------- 94
            |||:.|..|      ||..::...|.::|                   |:|.:.|.:        
  Fly   168 HLCKLCGARFSRRAELISHFKAHAEAQDAADAEAAAAAADSSSAIKFEHQTQRQLDDHYYEQEWP 232

  Fly    95 ----QQEVAAKPDEVHVDVVELIDQDDVVSMAQYLST------------------SFAEQHVEME 137
                |||.......|| ...:::::..:..:|.|..|                  ..:.|.:.:.
  Fly   233 LFQHQQEQENAQQNVH-QQHQIVEEGGIQLVASYPDTVAQPAAPSRGRISRLKPKEESSQFIVIS 296

  Fly   138 EKYGDQDCSAFTSDVGEEPLYASED---RDDEPEDSFQL----KPRPDEIENRELSRPSQLGSRL 195
            :| ..:|...:......:|:..:.:   .:..|:.:|.:    ||...:......:|...|.|..
  Fly   297 DK-SVEDSRPYMEPEPAQPVVTTSEFIAVEPPPQPNFPVLDHSKPFVCQQCGLAFAREKALVSHT 360

  Fly   196 -NHSANFIYKCAVCPRVFAKSESLTRH-----FSQAHKLTADVAAMKLANESCGT----GLLTCE 250
             ||..:..::|..|..:|..:.||..|     |.:::......:|.:..:||...    |...|.
  Fly   361 KNHRVDSPFECNQCQEMFWDNSSLQEHQKTHQFEESNSEYDPASAEESGSESEADEQLYGEFYCN 425

  Fly   251 HCPRTFKRQDTLRRHMQAFH---------------------------------------PDAIAL 276
            .|..:|.|||.||||.: .|                                       |.|:.:
  Fly   426 ECGISFHRQDLLRRHAK-MHCKPSDQAAVGSNSDVTAGGDVELAKDSSGHCCNTCGKSFPSALEM 489

  Fly   277 -----------------------------------EPEETTDNSA---------RKRIAKR---- 293
                                               .|.|...||.         ||.:.|.    
  Fly   490 LAHAEIHARFPPFKCVLCGISFYEEQAIKRHLHTRHPSELNANSCVLCGKECRDRKALIKHAWDH 554

  Fly   294 -----RDCPHCGLSF-PVSSLTIHIRRHTGDNPYKCDQCEKAFPRSQDLSLHMRQHTGERPSE-- 350
                 ..|..||.:| ..:.|..|:..|. |....|:.|::.||..:.||.|...|:...|.:  
  Fly   555 SREKCHSCSKCGKNFHNKARLKRHMASHR-DKSVVCEVCQEEFPDGRTLSNHRHSHSTTTPGKLF 618

  Fly   351 -CKICSKKFISQNKLARHMRLHTGQRPYSCKMCSKSFVQSNDLKIHMRRHTGERPYQCGVCGESF 414
             |..|.|.|.|::....|:|:|||:|||.|:.|.|:|.....|:.|.|.||||:||.|.||..:|
  Fly   619 PCLECGKTFGSRSSQQIHVRIHTGERPYGCRYCWKAFADGGTLRKHERIHTGEKPYACSVCPRAF 683

  Fly   415 ----VCGSHLNIHRNRKGHLIAVIPGNEVEANFAADPYVNARVNQRRSEDIERMRLQRIPENQLQ 475
                |...|:..|     |....:..|.......::...:       |.|:.:..:|....|..:
  Fly   684 NQRVVLREHIRSH-----HSGLDVARNTYHCTVCSEDLAS-------SNDLIQHLIQHSDSNTAK 736

  Fly   476 QRLENLPKPDVPAMCYKCGVCEQKFKSGALLTVHRNKMSHYEI 518
            ||     :|......||                .|.|:..:||
  Fly   737 QR-----QPVTGPRKYK----------------RRRKLQPHEI 758

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3281NP_650132.1 zf-AD 15..91 CDD:214871 11/52 (21%)
C2H2 Zn finger 205..226 CDD:275368 7/25 (28%)
C2H2 Zn finger 249..266 CDD:275368 9/16 (56%)
COG5048 <294..>391 CDD:227381 34/100 (34%)
C2H2 Zn finger 296..315 CDD:275368 6/19 (32%)
C2H2 Zn finger 323..343 CDD:275368 7/19 (37%)
C2H2 Zn finger 351..371 CDD:275368 7/19 (37%)
zf-H2C2_2 364..388 CDD:463886 12/23 (52%)
C2H2 Zn finger 379..399 CDD:275368 7/19 (37%)
zf-H2C2_2 391..416 CDD:463886 13/28 (46%)
C2H2 Zn finger 407..424 CDD:275368 6/20 (30%)
CG7987NP_650375.1 C2H2 Zn finger 142..162 CDD:275368
C2H2 Zn finger 170..186 CDD:275368 5/15 (33%)
COG5048 326..734 CDD:227381 95/421 (23%)
C2H2 Zn finger 343..363 CDD:275368 3/19 (16%)
C2H2 Zn finger 371..391 CDD:275368 6/19 (32%)
C2H2 Zn finger 424..444 CDD:275368 10/20 (50%)
zf-C2H2_8 427..522 CDD:464935 12/95 (13%)
C2H2 Zn finger 476..496 CDD:275368 2/19 (11%)
C2H2 Zn finger 504..523 CDD:275368 0/18 (0%)
C2H2 Zn finger 534..554 CDD:275370 3/19 (16%)
C2H2 Zn finger 562..582 CDD:275370 6/19 (32%)
C2H2 Zn finger 589..609 CDD:275368 7/19 (37%)
C2H2 Zn finger 620..640 CDD:275368 7/19 (37%)
C2H2 Zn finger 648..668 CDD:275368 7/19 (37%)
zf-H2C2_2 661..685 CDD:463886 13/23 (57%)
C2H2 Zn finger 676..696 CDD:275368 6/19 (32%)
C2H2 Zn finger 709..726 CDD:275371 2/23 (9%)
Blue background indicates that the domain is not in the aligned region.

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