DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3281 and CG18476

DIOPT Version :10

Sequence 1:NP_650132.1 Gene:CG3281 / 41445 FlyBaseID:FBgn0260741 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_731615.1 Gene:CG18476 / 41404 FlyBaseID:FBgn0037931 Length:936 Species:Drosophila melanogaster


Alignment Length:497 Identity:142/497 - (28%)
Similarity:212/497 - (42%) Gaps:114/497 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 ISSQT--CRVCLETHETNLYVHDEIKYNDLKLELWQLLEAVSKLKWTWTDPNLPMHLCQNCARRL 72
            |::||  |..|....:         |...|.:.|..:....|||        :|   ||.|:|:.
  Fly   483 ITNQTFECSECKRVFD---------KKKSLTVHLLSVHAEESKL--------IP---CQWCSRKF 527

  Fly    73 IGAYEFIVEVENAH----------ETLQNLFEQ----QEVAAKPDEVHVDVVELIDQDDVVSMAQ 123
            . .::::|:....|          |||.....:    :.:..:...:|.:  .::|....:.:..
  Fly   528 Y-RHDYLVKHLKRHGLKEHDIPLAETLIAATSRPNGAKRITCRMCNLHFE--RIVDLRAHIQLEL 589

  Fly   124 YLSTSFAEQHVEMEEKYGDQDCSAF--------TSD-----VGEEPLYASEDRDDEPEDSFQLKP 175
            .||.|. .|..:....|...:.|.|        |.|     ||..|:|..|      ..|.|.|.
  Fly   590 KLSLSL-HQSYDSPHNYSITNESGFELQLEDSETEDEMQPGVGSRPVYICE------LCSVQCKR 647

  Fly   176 RPDEIEN-RELSRPSQL-------------GSRLNH-------SANFIYKCAVCPRVFAKSESLT 219
            :.:.|:: |.:.|..::             .|.::|       |....:.|..|...|...|:|.
  Fly   648 KFEMIQHQRTMHRFDKMPHECDDCIFKCVSKSIMDHHRQGQCSSTEKKHACGKCSYKFMWPENLE 712

  Fly   220 RHFSQAHKL--------------TADVAAMKLANESCGTGLLTCEHCPRTFKRQDTLRRHMQAFH 270
            :|....|..              |.|:.  |.|.|. |..||.|.||.||::.:..|..|::..|
  Fly   713 QHILLQHSKSSVSNPTGDRHTQGTGDLE--KDATED-GIPLLQCPHCDRTYQMKSRLNNHIRDVH 774

  Fly   271 PDAIALEPEETTDNSARKRIAKRRDCPHCGL-SFPVSSLTIHIRRHTGDNPYKCDQCEKAFPRSQ 334
                      ...:..||...||..|..||: :...::|..|:|||||:.|:|||.||.||||..
  Fly   775 ----------INGDRKRKEAIKRFLCSLCGMETRSAAALVTHMRRHTGEKPFKCDLCEMAFPRHS 829

  Fly   335 DLSLHMRQHTGERPSECKICSKKFISQNKLARHMRLHTGQRPYSCKMCSKSFVQSNDLKIHMRRH 399
            :|:.|.|.||||:|..|.:|.|.|...:||.|||..|:|.:|:.|..|.||:.|:.|||:|:::|
  Fly   830 ELASHRRMHTGEKPFHCTVCGKDFARSDKLKRHMLTHSGLKPHKCTYCEKSYRQAKDLKLHLQQH 894

  Fly   400 TGERPYQCGVCGESFVCGSHLNIHRNRKGHLIAVIPGNEVEA 441
            |||.|:.||.|||.|:..|.|..||..:.|.      :||||
  Fly   895 TGECPFVCGTCGERFIQSSTLEKHRLMRRHF------DEVEA 930

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3281NP_650132.1 zf-AD 15..91 CDD:214871 18/85 (21%)
C2H2 Zn finger 205..226 CDD:275368 6/20 (30%)
C2H2 Zn finger 249..266 CDD:275368 6/16 (38%)
COG5048 <294..>391 CDD:227381 45/97 (46%)
C2H2 Zn finger 296..315 CDD:275368 6/19 (32%)
C2H2 Zn finger 323..343 CDD:275368 11/19 (58%)
C2H2 Zn finger 351..371 CDD:275368 9/19 (47%)
zf-H2C2_2 364..388 CDD:463886 11/23 (48%)
C2H2 Zn finger 379..399 CDD:275368 9/19 (47%)
zf-H2C2_2 391..416 CDD:463886 15/24 (63%)
C2H2 Zn finger 407..424 CDD:275368 8/16 (50%)
CG18476NP_731615.1 C2H2 Zn finger 206..227 CDD:275368
C2H2 Zn finger 236..256 CDD:275368
C2H2 Zn finger 401..422 CDD:275368
C2H2 Zn finger 431..447 CDD:275368
C2H2 Zn finger 461..481 CDD:275368
C2H2 Zn finger 490..511 CDD:275368 5/29 (17%)
C2H2 Zn finger 520..540 CDD:275368 5/20 (25%)
C2H2 Zn finger 638..659 CDD:275368 6/26 (23%)
C2H2 Zn finger 668..690 CDD:275368 2/21 (10%)
C2H2 Zn finger 698..715 CDD:275368 5/16 (31%)
C2H2 Zn finger 753..774 CDD:275368 7/20 (35%)
C2H2 Zn finger 790..810 CDD:275368 6/19 (32%)
COG5048 814..>886 CDD:227381 35/71 (49%)
C2H2 Zn finger 818..838 CDD:275368 11/19 (58%)
C2H2 Zn finger 846..866 CDD:275368 9/19 (47%)
C2H2 Zn finger 874..894 CDD:275368 9/19 (47%)
C2H2 Zn finger 902..924 CDD:275368 10/21 (48%)
Blue background indicates that the domain is not in the aligned region.

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