DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3281 and CG10654

DIOPT Version :10

Sequence 1:NP_650132.1 Gene:CG3281 / 41445 FlyBaseID:FBgn0260741 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_001261767.1 Gene:CG10654 / 39428 FlyBaseID:FBgn0036294 Length:412 Species:Drosophila melanogaster


Alignment Length:429 Identity:92/429 - (21%)
Similarity:154/429 - (35%) Gaps:107/429 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 CRVCLETHETNLYVHDEIKYNDLKLELWQLL--EAVSKLKWTWTDPNLPM-HLCQNCARRLIGAY 76
            ||.||.........|:.....||..:.:...  :||..|     .|.|.: .:|:.|.:.:...:
  Fly    40 CRACLVLLGPQDACHNLDSEQDLASKYYGCTGEDAVRDL-----PPQLVLKSICECCYQLVQKFH 99

  Fly    77 EFIVEVENAHETLQNLFEQQEVAAKPDEVHV--DVVELIDQDDVVSMAQYLSTSFAEQHVEMEEK 139
            :|......:....:.|.:..::.....|.|.  |:       |..|.:...:...|:.|.     
  Fly   100 DFQRMCAESLRNFEKLLQDIDIGCHKLEDHTWHDL-------DTPSESNESTNPEAQSHA----- 152

  Fly   140 YGDQDCSAFTSDVG------------------------EEPLYASEDRDDEPEDSFQLKPRPDEI 180
                .|.|.|.::.                        ||.:|..||...:           .::
  Fly   153 ----PCIAATQEIVSFIWPQVCLPLAVILSRITLGASLEEEVYVIEDESAK-----------QDL 202

  Fly   181 ENRELSRPSQ-LGSRLNHSANFIYKCAVCPRVFAKSESLTRHFSQAHKLTADVAAMKLANESCGT 244
            ...:||..|: ||:|.........:|.:|.|.|.|...|..|..| |:               |.
  Fly   203 GQEKLSISSKLLGARKRRGVRHTLECRICHRGFYKPSLLEAHMQQ-HE---------------GL 251

  Fly   245 GLLTCEHCPRTFKRQDTLRRHMQAFHPDAIALEPEETTDNSARKRIAKRRDCPHCGLSFPVS-SL 308
            ...||.||.:::.|.:.|..|::..|.:|          ::||...|    ||.|...:..: ||
  Fly   252 RPYTCVHCAKSYARANLLESHLRQMHNNA----------DAARIIYA----CPSCNKVYTANRSL 302

  Fly   309 TIHIRR-----HTGDNP---YKCDQCEKAFPRSQDLSLHMRQH---TGERPSECKICSKKFISQN 362
            ..|:||     |..::|   :.|::|.|.|.|...|:.|...|   .|.|.. |:.|.::|.::.
  Fly   303 KYHMRRTHERYHESESPDARHICEECGKCFARKAHLTRHKMVHGSVEGRRYC-CECCDRRFYTKE 366

  Fly   363 KLARHMRLHTGQRP--YSCKMCSKSFVQSNDLKIHMRRH 399
            .:..|:....|.:.  ..|:.|.:.|..|.:|..|.|:|
  Fly   367 NMVDHLLRKHGNKNLLLRCRKCGRIFQNSVELNAHGRKH 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3281NP_650132.1 zf-AD 15..91 CDD:214871 15/78 (19%)
C2H2 Zn finger 205..226 CDD:275368 8/20 (40%)
C2H2 Zn finger 249..266 CDD:275368 5/16 (31%)
COG5048 <294..>391 CDD:227381 29/110 (26%)
C2H2 Zn finger 296..315 CDD:275368 8/24 (33%)
C2H2 Zn finger 323..343 CDD:275368 7/19 (37%)
C2H2 Zn finger 351..371 CDD:275368 4/19 (21%)
zf-H2C2_2 364..388 CDD:463886 5/25 (20%)
C2H2 Zn finger 379..399 CDD:275368 7/19 (37%)
zf-H2C2_2 391..416 CDD:463886 4/9 (44%)
C2H2 Zn finger 407..424 CDD:275368
CG10654NP_001261767.1 zf-AD 39..115 CDD:462262 15/79 (19%)
C2H2 Zn finger 228..248 CDD:275368 8/20 (40%)
SFP1 <243..310 CDD:227516 24/96 (25%)
C2H2 Zn finger 256..313 CDD:275368 19/70 (27%)
SFP1 <287..376 CDD:227516 25/93 (27%)
C2H2 Zn finger 289..314 CDD:275368 8/24 (33%)
C2H2 Zn finger 325..345 CDD:275368 7/19 (37%)
C2H2 Zn finger 355..376 CDD:275368 4/20 (20%)
C2H2 Zn finger 385..405 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.

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