DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3281 and Plzf

DIOPT Version :10

Sequence 1:NP_650132.1 Gene:CG3281 / 41445 FlyBaseID:FBgn0260741 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_609540.2 Gene:Plzf / 34622 FlyBaseID:FBgn0032401 Length:469 Species:Drosophila melanogaster


Alignment Length:574 Identity:111/574 - (19%)
Similarity:197/574 - (34%) Gaps:204/574 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 ISSQTCRVCLETHETNLYVHDEI-----------KYNDLKLELWQLLEAVSKLKWTWTDPNLPMH 63
            :.|||.:.....|:.   :|.::           ::.||.||    |::...|       :|.:|
  Fly     2 LHSQTMQSIPTLHQP---LHSKVSNYLNNQRRTGQFCDLLLE----LDSDDSL-------SLSVH 52

  Fly    64 LCQNCARRLIGAYEFI----------------VEVEN------AHETLQNLFEQQEVAAKPDEVH 106
            .|...|:.     :||                :.:.|      .|..:...:|.....:|..|:|
  Fly    53 FCVLAAQS-----QFINSNQKQQQFSIHNPLKITIRNFSCTQCLHTIVDFFYEDLVSVSKEHELH 112

  Fly   107 V-DVVELIDQDDVVSMAQYLSTSFAEQHVEMEEKYGDQDCSAFTSDVGEEPLYASEDRDDEPEDS 170
            . ::.:::...:::::.|.                              :||..:::..:.|...
  Fly   113 FRELAQILAVTELLNLYQL------------------------------QPLGEAKEATEIPAPG 147

  Fly   171 FQLKPRPDE-------IENRE----LSRPSQL--GSRLNHSANFIYKCAVCPRVFAKSESLTRHF 222
             :.:|.||.       .|||:    |..|..:  .|::|:.....:||                 
  Fly   148 -EAQPNPDPEKKAEAVFENRQSYFKLKNPRAVKSSSKVNYCIGCDFKC----------------- 194

  Fly   223 SQAHKLTADVAAMKLANESCGTGLLTCEHCPRTF---KRQDT-LRRHMQAFHPDAIALEPEETTD 283
            .|..|:...:.       ||....|.|..|...|   :..|| ||||                 .
  Fly   195 YQVQKMIEHMG-------SCEPSHLICSLCEVGFLDWREYDTHLRRH-----------------S 235

  Fly   284 NSARKRIAKRRDCPHCGLSFPV-SSLTIHIRRHTGDNPYKCDQCEKAFPRSQDLSLHMRQHTGER 347
            ...||...    |..||:.|.. ::|.:|..:|:.:.|:.|..|.|.|...|.||.|:..|..|:
  Fly   236 GDLRKPFF----CLQCGIRFNTRAALLVHQPKHSTETPHICPHCGKGFKWKQGLSNHILVHNPEK 296

  Fly   348 PSECKICSKKFISQNKLARHMRLHTGQ-----------------------------RPYSCKMCS 383
            ...|.:|.........|..|..||||:                             |.:.|::|.
  Fly   297 QMLCDVCGYSTTHMKALKSHKLLHTGEFFACTVSGCKHRANRKENLKLHIETHKQGRDFICEVCG 361

  Fly   384 KSFVQSNDLKIHMRRHT--GERPYQCGVCGESFVCGSHLNIHRN--RKGHL--------IAVIPG 436
            ..|.||.:||.|..:||  |...|:|.:||        .:.||:  .|.|:        :.:...
  Fly   362 CKFSQSKNLKRHALKHTENGPNRYKCQLCG--------FSSHRSDKMKEHVQRVHTEKPVQLELS 418

  Fly   437 NEVEANFAAD---PYVNARVNQRRSEDIERMRLQRI-PENQLQQRLENLPKPDV 486
            ..|:::|..|   |.:... .:::.:.::...::.: |:.:|:..   |||..|
  Fly   419 ETVDSSFPDDFELPVIETS-PKKKPKSVKSKTIRNVNPDKRLKTL---LPKETV 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3281NP_650132.1 zf-AD 15..91 CDD:214871 16/108 (15%)
C2H2 Zn finger 205..226 CDD:275368 2/20 (10%)
C2H2 Zn finger 249..266 CDD:275368 8/20 (40%)
COG5048 <294..>391 CDD:227381 32/126 (25%)
C2H2 Zn finger 296..315 CDD:275368 6/19 (32%)
C2H2 Zn finger 323..343 CDD:275368 8/19 (42%)
C2H2 Zn finger 351..371 CDD:275368 4/19 (21%)
zf-H2C2_2 364..388 CDD:463886 10/52 (19%)
C2H2 Zn finger 379..399 CDD:275368 8/19 (42%)
zf-H2C2_2 391..416 CDD:463886 10/26 (38%)
C2H2 Zn finger 407..424 CDD:275368 3/16 (19%)
PlzfNP_609540.2 COG5048 <193..403 CDD:227381 63/262 (24%)
C2H2 Zn finger 214..234 CDD:275368 7/19 (37%)
C2H2 Zn finger 244..264 CDD:275368 6/19 (32%)
C2H2 Zn finger 272..292 CDD:275368 8/19 (42%)
C2H2 Zn finger 300..320 CDD:275368 4/19 (21%)
C2H2 Zn finger 330..349 CDD:275368 0/18 (0%)
C2H2 Zn finger 357..377 CDD:275368 8/19 (42%)
C2H2 Zn finger 387..408 CDD:275368 7/28 (25%)

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