DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3281 and zf30C

DIOPT Version :10

Sequence 1:NP_650132.1 Gene:CG3281 / 41445 FlyBaseID:FBgn0260741 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_477301.1 Gene:zf30C / 34292 FlyBaseID:FBgn0270924 Length:777 Species:Drosophila melanogaster


Alignment Length:350 Identity:88/350 - (25%)
Similarity:144/350 - (41%) Gaps:61/350 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 YASEDRDDEPEDSFQLKPRPDEIENRELSRPSQLGSRLNHSANFIYKCAVCPRVFAKSESLTRHF 222
            |....|||.         :.:|.|.:|:.:...:.::|:..   ::||.:|.:::...:.|..|.
  Fly   418 YEKHLRDDH---------KLNEAEMKEIFKDVDVHAKLDEE---VFKCPICSKIYLVEKRLVTHM 470

  Fly   223 SQAH----KLTAD--------VAAMKLANESCGT---GLLTCEHCPRTFKRQDTLRRHMQAFHPD 272
             :.|    |||..        .|..:.|.|....   .||.||.|.:.....|:|:.|.:.||  
  Fly   471 -KVHGEDGKLTFKCPCYCNLFFATKEQATEHARAQHKELLYCEKCDKYMTGHDSLKNHERNFH-- 532

  Fly   273 AIALEPEETTDNSARKRIAKRRD--CPHCGLSFP-VSSLTIHIRRHTGDNP-YKCDQCEKAFPRS 333
                        |.::..:::|:  |..||..|. .:||:.|:|...|..| |.|..|.|....:
  Fly   533 ------------SKKEPRSQQRNLICDKCGKKFTGRTSLSDHVRSDCGRLPLYGCSVCGKHLSTA 585

  Fly   334 QDLSLHMRQHTGERPSECKICSKKFISQNKLARHMRL-HTGQRPYSCKMCSKSFVQSNDLKIHMR 397
            ..|..||..|..:.|.:|..|.|.|..:.:...|::. ||..:||.|.:|.|.:.....|..||.
  Fly   586 GILKTHMLLHKADTPYQCDKCGKTFKVKAQYKSHLKTRHTDYKPYKCHLCPKEYPYRESLLTHMT 650

  Fly   398 RHTGERPYQCGVCGESFVCGSHLNIHRNRKGHLIAVIPGNEVEANFAADPYVNARVNQRRSEDIE 462
            .|||.:.:.|..||:.|.|.|:|..||             :|.|:......:||:..|.......
  Fly   651 VHTGIKRFLCNNCGKRFTCISNLQAHR-------------KVHADTCGQLPLNAKATQYMGVQRG 702

  Fly   463 RMRLQRIPENQLQ-QRLENLPKPDV 486
            ::.:...||..:: :..:.|...||
  Fly   703 KLLMGAKPEAGMEYEETKTLIAQDV 727

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3281NP_650132.1 zf-AD 15..91 CDD:214871
C2H2 Zn finger 205..226 CDD:275368 4/20 (20%)
C2H2 Zn finger 249..266 CDD:275368 5/16 (31%)
COG5048 <294..>391 CDD:227381 32/101 (32%)
C2H2 Zn finger 296..315 CDD:275368 8/19 (42%)
C2H2 Zn finger 323..343 CDD:275368 6/19 (32%)
C2H2 Zn finger 351..371 CDD:275368 5/20 (25%)
zf-H2C2_2 364..388 CDD:463886 8/24 (33%)
C2H2 Zn finger 379..399 CDD:275368 6/19 (32%)
zf-H2C2_2 391..416 CDD:463886 10/24 (42%)
C2H2 Zn finger 407..424 CDD:275368 7/16 (44%)
zf30CNP_477301.1 C2H2 Zn finger 33..53 CDD:275368
C2H2 Zn finger 61..82 CDD:275368
C2H2 Zn finger 98..117 CDD:275368
C2H2 Zn finger 134..152 CDD:275368
C2H2 Zn finger 511..532 CDD:275370 6/20 (30%)
COG5048 <523..>672 CDD:227381 48/162 (30%)
C2H2 Zn finger 546..566 CDD:275368 8/19 (42%)
C2H2 Zn finger 575..595 CDD:275368 6/19 (32%)
C2H2 Zn finger 603..624 CDD:275368 5/20 (25%)
C2H2 Zn finger 632..652 CDD:275368 6/19 (32%)
C2H2 Zn finger 660..680 CDD:275368 9/32 (28%)
Blue background indicates that the domain is not in the aligned region.

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