DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3281 and Zbtb17

DIOPT Version :9

Sequence 1:NP_650132.1 Gene:CG3281 / 41445 FlyBaseID:FBgn0260741 Length:538 Species:Drosophila melanogaster
Sequence 2:XP_038966007.1 Gene:Zbtb17 / 313666 RGDID:1307143 Length:819 Species:Rattus norvegicus


Alignment Length:405 Identity:110/405 - (27%)
Similarity:172/405 - (42%) Gaps:93/405 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 QYLSTSFAEQHVEM---EEKYGDQDCSAFTSDVGEEPLYASEDRDDEPEDSFQLKPRPDEIENRE 184
            ::..|...::|:.:   |:.:..::||...||   .....:.::...|     |||...|    |
  Rat   330 EFTHTGNFKRHIRIHTGEKPFSCRECSKAFSD---PAACKAHEKTHSP-----LKPYGCE----E 382

  Fly   185 LSRPSQLGSRLN-----HSANFIYKCAVCPRVFAKSESLTRHFSQAHKLTADVAAMKLANESCGT 244
            ..:..:|.|.||     ||....|:|..|.::|..|.:|.||              :|.:.  |.
  Rat   383 CGKSYRLISLLNLHKKRHSGEARYRCGDCGKLFTTSGNLKRH--------------QLVHS--GQ 431

  Fly   245 GLLTCEHCPRTFKRQDTLRRHMQAFHPDAIALEPEETTDNSARKRIAKRRDCPHCGLSF-PVSSL 308
            ....|::|.|:|....:..||::....|                   |...||||...| .|.:|
  Rat   432 KPYQCDYCGRSFSDPTSKMRHLETHDTD-------------------KEHKCPHCDKKFNQVGNL 477

  Fly   309 TIHIRRHTGDNPYKCDQCEKAFPRSQDLSLHMRQHTGERPSECKICSKKFISQNKLARHMRLHTG 373
            ..|::.|..|.|.||.:|.|.|..|.:|..|:|.|:||:|..|..|.::|.....|.||:|:|||
  Rat   478 KAHLKIHIADGPLKCRECGKQFTTSGNLKRHLRIHSGEKPYVCTHCQRQFADPGALQRHVRIHTG 542

  Fly   374 QRPYSCKMCSKSFVQSNDLKIHMRRHTGERPYQCGVCGESFVCGS----HLNIHRNRKGHLIAVI 434
            ::|..|.:|.|:|.|::.|..|:|:||||:||.|..||:.||..|    |:..|.|.:.|..:| 
  Rat   543 EKPCQCVICGKAFTQASSLIAHVRQHTGEKPYVCERCGKRFVQSSQLANHIRHHDNIRPHKCSV- 606

  Fly   435 PGNEVEANFAADPYVNARVNQRRSEDIERMRLQRIPENQLQQRLENLPKPDVPAMCYKCGVCEQK 499
                     .:..:||.       .|:.:..:....|.              |.:|.|||....:
  Rat   607 ---------CSKAFVNV-------GDLSKHIIIHTGEK--------------PYLCDKCGRGFNR 641

  Fly   500 FKS--GALLTVHRNK 512
            ..:  ..:.|||:.|
  Rat   642 VDNLRSHVKTVHQGK 656

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3281NP_650132.1 zf-AD 14..92 CDD:285071
C2H2 Zn finger 205..226 CDD:275368 7/20 (35%)
C2H2 Zn finger 249..266 CDD:275368 5/16 (31%)
COG5048 <294..>391 CDD:227381 40/97 (41%)
C2H2 Zn finger 296..315 CDD:275368 8/19 (42%)
zf-H2C2_2 307..330 CDD:290200 9/22 (41%)
C2H2 Zn finger 323..343 CDD:275368 8/19 (42%)
zf-H2C2_2 335..358 CDD:290200 9/22 (41%)
C2H2 Zn finger 351..371 CDD:275368 7/19 (37%)
zf-H2C2_2 364..388 CDD:290200 12/23 (52%)
C2H2 Zn finger 379..399 CDD:275368 8/19 (42%)
zf-H2C2_2 391..416 CDD:290200 13/24 (54%)
C2H2 Zn finger 407..424 CDD:275368 7/20 (35%)
Zbtb17XP_038966007.1 BTB_POZ_ZBTB17_MIZ1 2..113 CDD:349515
COG5048 322..653 CDD:227381 107/400 (27%)
C2H2 Zn finger 324..344 CDD:275368 2/13 (15%)
C2H2 Zn finger 352..372 CDD:275368 4/22 (18%)
C2H2 Zn finger 380..400 CDD:275368 6/23 (26%)
C2H2 Zn finger 408..428 CDD:275368 8/33 (24%)
C2H2 Zn finger 436..456 CDD:275368 6/19 (32%)
C2H2 Zn finger 464..484 CDD:275368 8/19 (42%)
C2H2 Zn finger 492..512 CDD:275368 8/19 (42%)
C2H2 Zn finger 520..540 CDD:275368 7/19 (37%)
C2H2 Zn finger 548..568 CDD:275368 8/19 (42%)
C2H2 Zn finger 576..596 CDD:275368 7/19 (37%)
C2H2 Zn finger 604..624 CDD:275368 4/36 (11%)
C2H2 Zn finger 632..651 CDD:275370 4/18 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.