DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3281 and CG11398

DIOPT Version :10

Sequence 1:NP_650132.1 Gene:CG3281 / 41445 FlyBaseID:FBgn0260741 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_569896.1 Gene:CG11398 / 31070 FlyBaseID:FBgn0040366 Length:329 Species:Drosophila melanogaster


Alignment Length:267 Identity:67/267 - (25%)
Similarity:108/267 - (40%) Gaps:38/267 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 EDSFQLKPRPDEIENRELSRPSQLGSRLNHSANFIYKCAVCPRVFAKSESLTRHFSQAHKLTADV 232
            ||. :|....:|::..||:..||  .:...|.:|:  |..||.:|...|.|..| ...|:...  
  Fly    20 EDE-ELSLNTEELQFEELNERSQ--HQQGGSPSFV--CRRCPALFLTREELAAH-RPTHRYQG-- 76

  Fly   233 AAMKLANESCGTGLLTCEHCPRTFKRQDTLRRHMQAFHPDAIALEPEETTDNSARKRIAKRRDCP 297
            .....|:|.      .|:.|.|.|::.:.|..||.| |.|                  .:...||
  Fly    77 GQQTPASEH------ACDACGRVFQKHNALVDHMNA-HND------------------VRNYPCP 116

  Fly   298 HCGLSF-PVSSLTIHIRR-HTGDNPYKCDQ--CEKAFPRSQDLSLHMRQ-HTGERPSECKICSKK 357
            .|...| ..|:...|::. |.....:.|.:  |:|.|.:.::...|::. |..||...|..||.:
  Fly   117 ECPARFVQRSNRECHLKNVHRKVYLHSCPEPGCKKRFQQRRECDQHVKTVHQNERNLVCDTCSAR 181

  Fly   358 FISQNKLARHMRLHTGQRPYSCKMCSKSFVQSNDLKIHMRRHTGERPYQCGVCGESFVCGSHLNI 422
            |.......:|:..|...:.|.|.:|.|.|.:..:..:|:..|:..:.|.|.|||..::..:.|..
  Fly   182 FSHPVNYRKHLASHGSAKSYGCPICGKLFGRPENRDVHLFVHSICKAYICSVCGADYMRRNQLIR 246

  Fly   423 HRNRKGH 429
            |....||
  Fly   247 HGLASGH 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3281NP_650132.1 zf-AD 15..91 CDD:214871
C2H2 Zn finger 205..226 CDD:275368 7/20 (35%)
C2H2 Zn finger 249..266 CDD:275368 5/16 (31%)
COG5048 <294..>391 CDD:227381 26/101 (26%)
C2H2 Zn finger 296..315 CDD:275368 6/20 (30%)
C2H2 Zn finger 323..343 CDD:275368 5/22 (23%)
C2H2 Zn finger 351..371 CDD:275368 5/19 (26%)
zf-H2C2_2 364..388 CDD:463886 7/23 (30%)
C2H2 Zn finger 379..399 CDD:275368 5/19 (26%)
zf-H2C2_2 391..416 CDD:463886 7/24 (29%)
C2H2 Zn finger 407..424 CDD:275368 5/16 (31%)
CG11398NP_569896.1 C2H2 Zn finger 52..72 CDD:275368 7/20 (35%)
C2H2 Zn finger 87..107 CDD:275368 8/20 (40%)
C2H2 Zn finger 115..136 CDD:275368 6/20 (30%)
C2H2 Zn finger 144..165 CDD:275368 5/20 (25%)
C2H2 Zn finger 175..195 CDD:275368 5/19 (26%)
C2H2 Zn finger 203..223 CDD:275368 5/19 (26%)
C2H2 Zn finger 231..247 CDD:275368 5/15 (33%)
Blue background indicates that the domain is not in the aligned region.

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