DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3281 and szy-5

DIOPT Version :10

Sequence 1:NP_650132.1 Gene:CG3281 / 41445 FlyBaseID:FBgn0260741 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_491745.2 Gene:szy-5 / 172281 WormBaseID:WBGene00016154 Length:603 Species:Caenorhabditis elegans


Alignment Length:425 Identity:99/425 - (23%)
Similarity:159/425 - (37%) Gaps:131/425 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 VEVENAHETLQNLFEQQEVAAKPDEVHVDVVE----LIDQDDVVSMAQYLSTSFAEQHVEMEEKY 140
            :..||.|      ||..|.|..|.|.|:.||.    |.|.:::|.::...|       ::.|.:.
 Worm   257 IPYENLH------FEHVEAAPGPSEPHLQVVAEGEILYDGEEIVDISNGKS-------LKEEIQN 308

  Fly   141 GDQDCSAFTSDVGEEPLYASED--RDDEPEDSFQLKPRPDEIENRELSRPSQLGSRLNHSANFIY 203
            ||.:......|:.||    .||  .:||..:..::...|:         |.:.|::         
 Worm   309 GDANIYGMIQDLEEE----VEDIGNEDEERERVRIMVNPN---------PPKRGTK--------- 351

  Fly   204 KCAVCPRVFAKSESLTRHFSQAHKLTA-------DVAAMKLANESCGTGLLTCEHCPRTFKRQDT 261
                         ||..|    |:.||       |.:.::||..|                    
 Worm   352 -------------SLRDH----HEATAATMEMIVDASILELAEPS-------------------- 379

  Fly   262 LRRHMQAFHPDAIALEPEETTDNSARKRIAKRR-------DCPHCGLSFPVSSLTIHIRRHTGDN 319
              ||::..:|..           |.||...||.       |....|:.  ||..:.|.|:    .
 Worm   380 --RHLKQGYPPI-----------SKRKNTGKRAENLDWIIDAVAKGVD--VSEASPHHRK----K 425

  Fly   320 P--YKCDQCEKAFPRSQDLSLHMRQHTGERPSECKICSKKFISQNKLARHMRLHTGQRPYSCKM- 381
            |  :||:.|.:.......:..|||.||||:|.:|:||...|..:..:..|:|.|..|:||.|.: 
 Worm   426 PTLHKCEYCGRVDKYPSKIRAHMRTHTGEKPFKCEICGMAFSQKTPMRLHLRRHFDQKPYECDVD 490

  Fly   382 -CSKSFVQSNDLKIHM-RRHTGERPYQCG-VCGESFVCGSHLNIHRNR---------KGHLIAVI 434
             |.:.||....||:|: ::|..::.|.|. .||..|....:...|..:         :|...:|.
 Worm   491 GCKERFVSGAILKMHVEKKHLNKKKYVCSRGCGRVFSSAYNQKHHEKKCEQTYVTWVEGEQQSVE 555

  Fly   435 PGNEVEANFAADP-----YVNARVNQRRSEDIERM 464
            .|.|.|.:....|     |::..::...|:.|.|:
 Worm   556 SGEEDEESNGEYPDDDEEYMDDMIDASTSQPINRV 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3281NP_650132.1 zf-AD 15..91 CDD:214871 3/10 (30%)
C2H2 Zn finger 205..226 CDD:275368 3/20 (15%)
C2H2 Zn finger 249..266 CDD:275368 1/16 (6%)
COG5048 <294..>391 CDD:227381 32/107 (30%)
C2H2 Zn finger 296..315 CDD:275368 5/18 (28%)
C2H2 Zn finger 323..343 CDD:275368 5/19 (26%)
C2H2 Zn finger 351..371 CDD:275368 6/19 (32%)
zf-H2C2_2 364..388 CDD:463886 9/25 (36%)
C2H2 Zn finger 379..399 CDD:275368 7/22 (32%)
zf-H2C2_2 391..416 CDD:463886 9/26 (35%)
C2H2 Zn finger 407..424 CDD:275368 4/17 (24%)
szy-5NP_491745.2 C2H2 Zn finger 73..93 CDD:275368
C2H2 Zn finger 101..121 CDD:275368
C2H2 Zn finger 129..149 CDD:275368
C2H2 Zn finger 431..451 CDD:275368 5/19 (26%)
zf-H2C2_2 447..468 CDD:463886 12/20 (60%)
C2H2 Zn finger 459..479 CDD:275368 6/19 (32%)
C2H2 Zn finger 487..506 CDD:275368 6/18 (33%)
Blue background indicates that the domain is not in the aligned region.

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