DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3281 and ZNF550

DIOPT Version :10

Sequence 1:NP_650132.1 Gene:CG3281 / 41445 FlyBaseID:FBgn0260741 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_001264019.1 Gene:ZNF550 / 162972 HGNCID:28643 Length:422 Species:Homo sapiens


Alignment Length:229 Identity:79/229 - (34%)
Similarity:109/229 - (47%) Gaps:36/229 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 HSANFIYKCAVCPRVFAKSESLTRHFSQAHKLTADVAAMKLANESCGTGLLTCEHCPRTFKRQDT 261
            |:....|:|..|.:.|::|.:|.||: ..|               .|.....|..|.:.|||:..
Human   225 HTGMKPYECNACGKAFSQSSTLIRHY-LIH---------------TGEKPYKCLECGKAFKRRSY 273

  Fly   262 LRRHMQAFHPDAIALEPEETTDNSARKRIAKRRDCPHCGLSFPVSSLTI-HIRRHTGDNPYKCDQ 325
            |.:|    ||.....:|.|               |..|..:|...|..| |.|.|||:.|::|.:
Human   274 LMQH----HPIHTGEKPYE---------------CSQCRKAFTHRSTFIRHNRTHTGEKPFECKE 319

  Fly   326 CEKAFPRSQDLSLHMRQHTGERPSECKICSKKFISQNKLARHMRLHTGQRPYSCKMCSKSFVQSN 390
            |||||.....|..|...||||:|.:|..|.|.|...::|.:|.|:|||::||.|..|.|:|.:|.
Human   320 CEKAFSNRAHLIQHYIIHTGEKPYDCMACGKAFRCSSELIQHQRIHTGEKPYECTQCGKAFHRST 384

  Fly   391 DLKIHMRRHTGERPYQCGVCGESFVCGSHLNIHR 424
            .|..|...||||.||:|..||::|...|||..|:
Human   385 YLIQHSVIHTGEMPYKCIECGKAFKRRSHLLQHQ 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3281NP_650132.1 zf-AD 15..91 CDD:214871
C2H2 Zn finger 205..226 CDD:275368 7/20 (35%)
C2H2 Zn finger 249..266 CDD:275368 6/16 (38%)
COG5048 <294..>391 CDD:227381 41/97 (42%)
C2H2 Zn finger 296..315 CDD:275368 7/19 (37%)
C2H2 Zn finger 323..343 CDD:275368 8/19 (42%)
C2H2 Zn finger 351..371 CDD:275368 7/19 (37%)
zf-H2C2_2 364..388 CDD:463886 12/23 (52%)
C2H2 Zn finger 379..399 CDD:275368 7/19 (37%)
zf-H2C2_2 391..416 CDD:463886 12/24 (50%)
C2H2 Zn finger 407..424 CDD:275368 7/16 (44%)
ZNF550NP_001264019.1 KRAB 12..72 CDD:214630
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 113..158
COG5048 <200..357 CDD:227381 50/166 (30%)
C2H2 Zn finger 205..225 CDD:275368 79/229 (34%)
C2H2 Zn finger 233..253 CDD:275368 7/20 (35%)
C2H2 Zn finger 261..281 CDD:275368 9/23 (39%)
C2H2 Zn finger 289..309 CDD:275368 7/19 (37%)
C2H2 Zn finger 317..337 CDD:275368 8/19 (42%)
C2H2 Zn finger 345..365 CDD:275368 7/19 (37%)
zf-H2C2_2 357..380 CDD:463886 11/22 (50%)
C2H2 Zn finger 373..393 CDD:275368 7/19 (37%)
zf-H2C2_2 385..410 CDD:463886 12/24 (50%)
C2H2 Zn finger 401..421 CDD:275368 8/18 (44%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.