DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3281 and ZNF560

DIOPT Version :9

Sequence 1:NP_650132.1 Gene:CG3281 / 41445 FlyBaseID:FBgn0260741 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_689689.2 Gene:ZNF560 / 147741 HGNCID:26484 Length:790 Species:Homo sapiens


Alignment Length:471 Identity:121/471 - (25%)
Similarity:182/471 - (38%) Gaps:132/471 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 STSFA---EQHVEMEEKYGDQDCSAFTSDVGEEPLYASEDRDDEPEDSFQLKPRPDEIENRELSR 187
            |||.|   |.|: ::..|..::|       |::..|.:. .::..:....:||...:...:..:.
Human   332 STSHAVNVETHI-IKNPYECKEC-------GKDFRYPTH-LNNHMQTHIGIKPYKCKHCGKTFTV 387

  Fly   188 PSQLGSRL-NHSANFIYKCAVCPRVFAKSESLTRHFSQAHKLTADVAAMKLANESCGTGLLTCEH 251
            ||.....: .|:....|.|..|.:.|..|..|..|. :.|           |.|.    ...|:|
Human   388 PSGFLEHVRTHTGEKPYGCKECGKAFGTSAGLIEHI-RCH-----------AREK----TFKCDH 436

  Fly   252 CPRTFKRQDTLRRHM---------------QAFHPDAIALEPEETTDNSARKRIAKRRDCPHCGL 301
            |.:.|....:|..|:               :||...:..:  |:...|:.:||.    ||..||.
Human   437 CGKAFISYPSLFGHLRVHNGEKPYEHKEYGKAFGTSSGVI--EDRRSNTGQKRF----DCDQCGK 495

  Fly   302 SF-PVSSLTIHIRRHTGDNPYKCDQCEKAFPRSQDLSLHMRQHT--------------------- 344
            .| ..|||..|:|.|||:.|:||.:|.|.|..|..|.:|||.||                     
Human   496 VFVSFSSLFAHLRTHTGEKPFKCYKCGKPFTSSACLRIHMRTHTEERLYQCKKCGKAFTKCSYLT 560

  Fly   345 -------GERPSECKICSKKFISQNKLARHMRLHTGQRPYSCKMCSKSFVQSNDLKIHMRRHTGE 402
                   ||:|.||..|.|.|..::.|.:|:|.|:|::||.||.|.|:|.:.:||..|:|||||:
Human   561 KHLRTHAGEKPYECMKCGKAFTERSYLTKHLRRHSGEKPYECKKCGKAFTERSDLTKHLRRHTGD 625

  Fly   403 RPYQCGVCGESFVCGS----HLNIHRNRK------------------GHLIAVIPGNEVEANFAA 445
            :||:...||::||..|    ||..|...|                  .||.........|.|...
Human   626 KPYEYKDCGKAFVVSSSLVDHLRTHTGYKPYKCNACEKAYSRSCVLTQHLKTHAAEKTSECNACG 690

  Fly   446 DPYVNARVNQRRSEDIERMRLQRIPENQLQQRLENLPKPDVPAMCYKCGVCEQKFKSGALLTVHR 510
            :.:.|:.....|.:.:.::                  ||      |||..|      |...|.|.
Human   691 NSFRNSMCFHDRLKTLTKI------------------KP------YKCKDC------GKAFTCHS 725

  Fly   511 NKMSHYEIERVYENPF 526
            :..:|..| ...|.|:
Human   726 DLTNHVRI-HTGEKPY 740

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3281NP_650132.1 zf-AD 14..92 CDD:285071
C2H2 Zn finger 205..226 CDD:275368 6/20 (30%)
C2H2 Zn finger 249..266 CDD:275368 5/16 (31%)
COG5048 <294..>391 CDD:227381 46/125 (37%)
C2H2 Zn finger 296..315 CDD:275368 9/19 (47%)
zf-H2C2_2 307..330 CDD:290200 12/22 (55%)
C2H2 Zn finger 323..343 CDD:275368 9/19 (47%)
zf-H2C2_2 335..358 CDD:290200 13/50 (26%)
C2H2 Zn finger 351..371 CDD:275368 7/19 (37%)
zf-H2C2_2 364..388 CDD:290200 12/23 (52%)
C2H2 Zn finger 379..399 CDD:275368 9/19 (47%)
zf-H2C2_2 391..416 CDD:290200 13/24 (54%)
C2H2 Zn finger 407..424 CDD:275368 7/20 (35%)
ZNF560NP_689689.2 KRAB 13..69 CDD:214630
KRAB 13..50 CDD:279668
KRAB 110..161 CDD:214630
KRAB 110..149 CDD:279668
C2H2 Zn finger 294..314 CDD:275368
C2H2 Zn finger 323..342 CDD:275368 5/9 (56%)
COG5048 344..754 CDD:227381 115/458 (25%)
C2H2 Zn finger 350..370 CDD:275368 3/27 (11%)
zf-H2C2_2 362..386 CDD:290200 2/24 (8%)
C2H2 Zn finger 378..398 CDD:275368 2/19 (11%)
C2H2 Zn finger 406..426 CDD:275368 6/20 (30%)
C2H2 Zn finger 434..454 CDD:275368 6/19 (32%)
C2H2 Zn finger 490..510 CDD:275368 9/19 (47%)
zf-H2C2_2 502..527 CDD:290200 13/24 (54%)
C2H2 Zn finger 518..538 CDD:275368 9/19 (47%)
zf-H2C2_2 531..554 CDD:290200 6/22 (27%)
C2H2 Zn finger 546..566 CDD:275368 0/19 (0%)
zf-H2C2_2 558..582 CDD:290200 7/23 (30%)
C2H2 Zn finger 574..594 CDD:275368 7/19 (37%)
zf-H2C2_2 586..610 CDD:290200 11/23 (48%)
zf-C2H2 600..622 CDD:278523 10/21 (48%)
C2H2 Zn finger 602..622 CDD:275368 9/19 (47%)
C2H2 Zn finger 630..650 CDD:275368 7/19 (37%)
C2H2 Zn finger 658..678 CDD:275368 2/19 (11%)
C2H2 Zn finger 714..734 CDD:275368 7/26 (27%)
zf-H2C2_2 726..751 CDD:290200 4/16 (25%)
C2H2 Zn finger 742..762 CDD:275368
zf-H2C2_2 757..779 CDD:290200
C2H2 Zn finger 770..790 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165146663
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.930

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