DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3281 and PRDM5

DIOPT Version :9

Sequence 1:NP_650132.1 Gene:CG3281 / 41445 FlyBaseID:FBgn0260741 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_001366033.1 Gene:PRDM5 / 11107 HGNCID:9349 Length:641 Species:Homo sapiens


Alignment Length:469 Identity:120/469 - (25%)
Similarity:180/469 - (38%) Gaps:149/469 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 QTCR-----VC--------------LETHETNLYVHDEIKYNDLKLELWQLLEAVSKLKWTWTDP 58
            :|||     ||              |:.|:.|::..|..|                ||       
Human   254 ETCRGDARFVCKADSCGKRLKSKDALKRHQENVHTGDPKK----------------KL------- 295

  Fly    59 NLPMHLCQNCARRLIGAYEFIVEVENAHETLQNLFEQQEVAAKPDEVHVDVVELIDQDDVVSMAQ 123
                 :|..|.::...|...     ..|..:..:|:.||                      .|.:
Human   296 -----ICSVCNKKCSSASSL-----QEHRKIHEIFDCQE----------------------CMKK 328

  Fly   124 YLSTSFAEQHVEMEEKYGDQDCSAFTSDVGEEPLYASEDRDDEPEDSFQLKPRP--DEIENRELS 186
            ::|.:..::|:...            ||:...||.            |.::.||  .||.|:...
Human   329 FISANQLKRHMITH------------SDMRLSPLI------------FLIEKRPYNCEICNKSFK 369

  Fly   187 RPSQLGS-RLNHSANFIYKCAVCPRVFAKSESLTRHFSQAHKLT---------ADVAAMKLANES 241
            |..|:|: ::.||.:..|||.:|.:.||.     |:..:.||.|         .:..|:.....|
Human   370 RLDQVGAHKVIHSEDKPYKCKLCGKGFAH-----RNVYKNHKKTHSEERPFQCEECKALFRTPFS 429

  Fly   242 CGTGLL--------TCEHCPRTFKRQDTLRRHMQAFH-----------------PDAIALEPEET 281
            ....||        .|.||..||||:|||..|:|..|                 |.  .|...:.
Human   430 LQRHLLIHNSERTFKCHHCDATFKRKDTLNVHVQVVHERHKKYRCELCNKAFVTPS--VLRSHKK 492

  Fly   282 TDNSARKRIAKRRDCPHCGLSFPVS-SLTIHIRRHTGDNPYKCDQCEKAFPRSQDLSLHMRQHTG 345
            |....:::|     ||:||..|..| :|.:|||.|||:.||:|..|||.|.::..|.:|:|.||.
Human   493 THTGEKEKI-----CPYCGQKFASSGTLRVHIRSHTGERPYQCPYCEKGFSKNDGLKMHIRTHTR 552

  Fly   346 ERPSECKICSKKFISQNKLARHMRLHTGQRPYSCKMCSKSFVQSNDLKIHMRRHTGERPY-QCGV 409
            |:|.:|..|||.|..:..|..|.|.|||::|:.|.:|..:|.....|..|...|...||. :|..
Human   553 EKPYKCSECSKAFSQKRGLDEHKRTHTGEKPFQCDVCDLAFSLKKMLIRHKMTHNPNRPLAECQF 617

  Fly   410 CGESFVCGSHLNIH 423
            |.:.|....:|.:|
Human   618 CHKKFTRNDYLKVH 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3281NP_650132.1 zf-AD 14..92 CDD:285071 16/96 (17%)
C2H2 Zn finger 205..226 CDD:275368 5/20 (25%)
C2H2 Zn finger 249..266 CDD:275368 10/16 (63%)
COG5048 <294..>391 CDD:227381 42/97 (43%)
C2H2 Zn finger 296..315 CDD:275368 10/19 (53%)
zf-H2C2_2 307..330 CDD:290200 13/22 (59%)
C2H2 Zn finger 323..343 CDD:275368 8/19 (42%)
zf-H2C2_2 335..358 CDD:290200 11/22 (50%)
C2H2 Zn finger 351..371 CDD:275368 8/19 (42%)
zf-H2C2_2 364..388 CDD:290200 10/23 (43%)
C2H2 Zn finger 379..399 CDD:275368 5/19 (26%)
zf-H2C2_2 391..416 CDD:290200 8/25 (32%)
C2H2 Zn finger 407..424 CDD:275368 5/17 (29%)
PRDM5NP_001366033.1 PR-SET_PRDM5 2..128 CDD:380967
COG5048 <145..338 CDD:227381 21/138 (15%)
C2H2 Zn finger 169..190 CDD:275368
C2H2 Zn finger 201..221 CDD:275368
C2H2 Zn finger 236..256 CDD:275368 0/1 (0%)
COG5048 262..631 CDD:227381 116/459 (25%)
C2H2 Zn finger 264..287 CDD:275368 4/22 (18%)
C2H2 Zn finger 297..317 CDD:275368 4/24 (17%)
C2H2 Zn finger 322..342 CDD:275368 5/41 (12%)
C2H2 Zn finger 361..381 CDD:275368 6/19 (32%)
C2H2 Zn finger 389..409 CDD:275368 7/24 (29%)
C2H2 Zn finger 417..437 CDD:275368 4/19 (21%)
C2H2 Zn finger 445..462 CDD:275368 10/16 (63%)
C2H2 Zn finger 474..494 CDD:275368 2/21 (10%)
C2H2 Zn finger 502..522 CDD:275368 10/19 (53%)
C2H2 Zn finger 530..550 CDD:275368 8/19 (42%)
C2H2 Zn finger 558..578 CDD:275368 8/19 (42%)
C2H2 Zn finger 586..606 CDD:275368 5/19 (26%)
C2H2 Zn finger 615..636 CDD:275368 5/17 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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