DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3281 and znf1008

DIOPT Version :10

Sequence 1:NP_650132.1 Gene:CG3281 / 41445 FlyBaseID:FBgn0260741 Length:538 Species:Drosophila melanogaster
Sequence 2:XP_005171144.1 Gene:znf1008 / 101886637 ZFINID:ZDB-GENE-131121-84 Length:390 Species:Danio rerio


Alignment Length:349 Identity:101/349 - (28%)
Similarity:141/349 - (40%) Gaps:105/349 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   245 GLLTCEHCPRTFKRQDTLRRHMQAFHPDAIALEPEETTDNSARKRIAKRRDCPHCGLSFPV-SSL 308
            |..:|..|.::|.|:..|..|| ..|..                  .:...||.|..||.. .||
Zfish    52 GSFSCPQCGKSFTRKGHLEVHM-VIHTG------------------ERPYTCPQCAKSFTCKGSL 97

  Fly   309 TIHIRRHTGDNPYKCDQCEKAFPRSQDLSLHMRQHTGERPSECKICSKKFISQNKLARHMRLHTG 373
            ..|.|.|||:.|:.|.||||:|..|..|..|:|.||||||..|:.|:|.|.|..:|.||||:|:.
Zfish    98 KDHFRIHTGERPFTCPQCEKSFTNSGGLKRHLRIHTGERPFTCRQCAKSFPSSGELKRHMRIHSR 162

  Fly   374 QRPYSCKMCSKSFVQSNDLKIHMRRHTGERPYQCGVCGESFVCGSHLNIHR-------------- 424
            .|||:|..|.||:.|...|:.|.:.|:||:|:.|.:||:||...|.|.:|.              
Zfish   163 DRPYTCPQCGKSYKQKEVLREHTKTHSGEKPFTCTLCGKSFTQQSTLKVHMKVHSGEKLHQCPEC 227

  Fly   425 --------NRKGHLIAVIPGNEVEANFAADP-------YVNARVNQRRSEDIER----------- 463
                    |.|.||::    :..|..|:.:.       .|:.:.:.|..||..|           
Zfish   228 GRRFAEACNLKTHLLS----HTGERPFSCEKCEKKFFLAVHLKTHMRIHEDERRYVCSFCGKSFL 288

  Fly   464 ------------------------MRLQRIPENQLQQRLENLPKPDVPAMCYKCGVCEQKFKSGA 504
                                    ....|..|.::.:|:....||      |||..||:.|...:
Zfish   289 WLNGFKDHQKTHIGEKPYECLECGKTFARAAELKVHERIHTGEKP------YKCSHCEKSFTQSS 347

  Fly   505 LLTVHRNKMSHYEIERVY--ENPF 526
            .|.||         |||:  |.|:
Zfish   348 GLKVH---------ERVHTGEKPY 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3281NP_650132.1 zf-AD 15..91 CDD:214871
C2H2 Zn finger 205..226 CDD:275368
C2H2 Zn finger 249..266 CDD:275368 5/16 (31%)
COG5048 <294..>391 CDD:227381 48/97 (49%)
C2H2 Zn finger 296..315 CDD:275368 9/19 (47%)
C2H2 Zn finger 323..343 CDD:275368 10/19 (53%)
C2H2 Zn finger 351..371 CDD:275368 10/19 (53%)
zf-H2C2_2 364..388 CDD:463886 13/23 (57%)
C2H2 Zn finger 379..399 CDD:275368 7/19 (37%)
zf-H2C2_2 391..416 CDD:463886 11/24 (46%)
C2H2 Zn finger 407..424 CDD:275368 7/16 (44%)
znf1008XP_005171144.1 C2H2 Zn finger 56..76 CDD:275368 7/20 (35%)
COG5048 80..>383 CDD:227381 92/302 (30%)
C2H2 Zn finger 84..104 CDD:275368 9/19 (47%)
C2H2 Zn finger 112..132 CDD:275368 10/19 (53%)
C2H2 Zn finger 140..160 CDD:275368 10/19 (53%)
C2H2 Zn finger 168..188 CDD:275368 7/19 (37%)
C2H2 Zn finger 196..216 CDD:275368 8/19 (42%)
C2H2 Zn finger 224..244 CDD:275368 4/23 (17%)
C2H2 Zn finger 252..272 CDD:275368 2/19 (11%)
C2H2 Zn finger 280..300 CDD:275368 0/19 (0%)
C2H2 Zn finger 308..328 CDD:275368 3/19 (16%)
C2H2 Zn finger 336..356 CDD:275368 9/28 (32%)
C2H2 Zn finger 364..382 CDD:275368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.