DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3281 and gli2

DIOPT Version :10

Sequence 1:NP_650132.1 Gene:CG3281 / 41445 FlyBaseID:FBgn0260741 Length:538 Species:Drosophila melanogaster
Sequence 2:XP_002943329.3 Gene:gli2 / 100498653 XenbaseID:XB-GENE-481810 Length:1474 Species:Xenopus tropicalis


Alignment Length:399 Identity:96/399 - (24%)
Similarity:155/399 - (38%) Gaps:98/399 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 LSTSFAEQH----VEMEEKYGDQDCSAFTSDVGEEPLYASEDRDDEPEDSFQLKPR--------- 176
            :|.:|:..|    |..::....|  .:.||..|..||.       .|..:|  .||         
 Frog   272 ISPAFSFPHPINPVAYQQLLSQQ--RSLTSSFGHAPLL-------HPSPTF--APRQQGALTSAN 325

  Fly   177 ----------PDEIENRELSRPSQLGSRLNHSANFIYKCAVCP---RVFAKSESLTR-------H 221
                      ||.:.|:. |..|.:.|.:|.         |.|   :|..:.|.|.|       |
 Frog   326 PAPPSNNSSTPDSVLNKG-SSESAVSSTVNQ---------VIPKRSKVKMEDEGLQRDSPSPPDH 380

  Fly   222 FSQAHKLTADVAAMKLANESCGTGLLTC--EHCPRTFKRQDTLRRHMQAFHPDAIALEPEETTDN 284
            .:.   |..|:...:...|........|  :.|...|..||.|..|:...|           ...
 Frog   381 LTD---LKEDLDKDECKQEPDVIYETNCHWDGCSHEFDTQDQLVHHINNDH-----------IHG 431

  Fly   285 SARKRIAKRRDCPHCGLSFPVS-SLTIHIRRHTGDNPYKC--DQCEKAFPRSQDLSLHMRQHTGE 346
            ..::.:.:..||......|... .|.:|:|||||:.|:||  :.|.||:.|.::|..|:|.||||
 Frog   432 EKKEFVCRWHDCSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCYKAYSRLENLKTHLRSHTGE 496

  Fly   347 RPSECKI--CSKKFISQNKLARHM-RLHTGQRPYSCKM--CSKSFVQSNDLKIHMRRHTGERPYQ 406
            :|..|:.  |:|.|.:.:..|:|. |.|:.::||.||:  |:|.:...:.|:.|::...|..   
 Frog   497 KPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYICKIPGCTKRYTDPSSLRKHVKTVHGPE--- 558

  Fly   407 CGVCGESFVCGSHL-NIHRN---RKGHLIAVIPGNEVEANFAADPYVNARVNQRRSEDIERMRLQ 467
                       :|: ..|||   :|..:......||..|..:...:.|:...:|  ||..:.|..
 Frog   559 -----------AHVTKKHRNDIIQKPSVTKENGDNEASAKLSGREHPNSAPRER--EDCLQARSI 610

  Fly   468 RIPENQLQQ 476
            :..:|.:.|
 Frog   611 KTEDNMMHQ 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3281NP_650132.1 zf-AD 15..91 CDD:214871
C2H2 Zn finger 205..226 CDD:275368 7/30 (23%)
C2H2 Zn finger 249..266 CDD:275368 6/18 (33%)
COG5048 <294..>391 CDD:227381 39/104 (38%)
C2H2 Zn finger 296..315 CDD:275368 5/19 (26%)
C2H2 Zn finger 323..343 CDD:275368 8/21 (38%)
C2H2 Zn finger 351..371 CDD:275368 7/22 (32%)
zf-H2C2_2 364..388 CDD:463886 10/26 (38%)
C2H2 Zn finger 379..399 CDD:275368 6/21 (29%)
zf-H2C2_2 391..416 CDD:463886 3/24 (13%)
C2H2 Zn finger 407..424 CDD:275368 1/17 (6%)
gli2XP_002943329.3 C2H2 Zn finger 441..463 CDD:275368 6/21 (29%)
SFP1 <465..555 CDD:227516 32/89 (36%)
C2H2 Zn finger 471..493 CDD:275368 8/21 (38%)
C2H2 Zn finger 501..524 CDD:275368 7/22 (32%)
C2H2 Zn finger 532..553 CDD:275368 6/20 (30%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.