DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3281 and si:ch211-161m3.6

DIOPT Version :10

Sequence 1:NP_650132.1 Gene:CG3281 / 41445 FlyBaseID:FBgn0260741 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_001314790.1 Gene:si:ch211-161m3.6 / 100005838 ZFINID:ZDB-GENE-161017-36 Length:295 Species:Danio rerio


Alignment Length:380 Identity:105/380 - (27%)
Similarity:149/380 - (39%) Gaps:117/380 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 EDRDDEPEDSFQLK---------PRPDEIENRELSRPSQLGSRLNHSANFIYKCAVCPRVFAKSE 216
            |..|.:.||.|.:|         |.|.:.|::||....:.|...|:                   
Zfish     7 ECEDIKTEDVFIVKMEDAEEHTDPLPVKEESQELDEVEEKGPFENY------------------- 52

  Fly   217 SLTRHF----SQAHKLTAD-VAAMKLANESCGTGLLTCEHCPRTFKRQDTLRRHMQAFHPDAIAL 276
               :||    ...|:...| .::.:...|........|..|.:.|.::.:|.|||:....:    
Zfish    53 ---QHFVTGGQSFHRARTDRTSSQEKVQEIDPISYFICFQCGKGFTQKGSLNRHMRTHTGE---- 110

  Fly   277 EPEETTDNSARKRIAKRRDCPHCGLSF-PVSSLTIHIRRHTGDNPYKCDQCEKAFPRSQDLSLHM 340
                           |...||.||.|| ...:|.:|:..|:|:.|:.|.||.|:|.|..:|..||
Zfish   111 ---------------KPYSCPLCGKSFNQHGNLEVHMGVHSGETPFACQQCGKSFSRKGNLRYHM 160

  Fly   341 RQHTGERPSECKICSKKFISQNKLARHMRLHTGQRPYSCKMCSKSFVQSNDLKIHMRRHTGERPY 405
            |.||||.|..|:.|...|.::..|.||||:|||:|||:|..|.:||.|...||:|||.||||:||
Zfish   161 RVHTGECPFTCQQCGISFTAKGSLTRHMRIHTGERPYTCSECGESFEQHGSLKVHMRTHTGEKPY 225

  Fly   406 QCGVCGESFVCGSHLNIHRNRKGHLIAVIPGNEVEANFAADPYVNARVNQRRSEDIERMRLQRIP 470
            .|..||:||      :.|.|.|.||                                        
Zfish   226 TCQQCGKSF------DQHGNLKVHL---------------------------------------- 244

  Fly   471 ENQLQQRLENLPKPDVPAMCYKCGVCEQKFKSGALLTVHRNKMSHYEIERVYENP 525
                  |:....||      |:|..|.:.|.....|:.|.|.:..   :.||.:|
Zfish   245 ------RIHTGEKP------YECPQCAKTFDQHGNLSAHENSLRG---KAVYVSP 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3281NP_650132.1 zf-AD 15..91 CDD:214871
C2H2 Zn finger 205..226 CDD:275368 2/24 (8%)
C2H2 Zn finger 249..266 CDD:275368 5/16 (31%)
COG5048 <294..>391 CDD:227381 45/97 (46%)
C2H2 Zn finger 296..315 CDD:275368 8/19 (42%)
C2H2 Zn finger 323..343 CDD:275368 10/19 (53%)
C2H2 Zn finger 351..371 CDD:275368 8/19 (42%)
zf-H2C2_2 364..388 CDD:463886 15/23 (65%)
C2H2 Zn finger 379..399 CDD:275368 10/19 (53%)
zf-H2C2_2 391..416 CDD:463886 16/24 (67%)
C2H2 Zn finger 407..424 CDD:275368 5/16 (31%)
si:ch211-161m3.6NP_001314790.1 COG5048 <65..234 CDD:227381 69/187 (37%)
C2H2 Zn finger 87..107 CDD:275368 7/19 (37%)
C2H2 Zn finger 115..135 CDD:275368 8/19 (42%)
C2H2 Zn finger 143..163 CDD:275368 10/19 (53%)
C2H2 Zn finger 171..191 CDD:275368 8/19 (42%)
C2H2 Zn finger 199..219 CDD:275368 10/19 (53%)
C2H2 Zn finger 227..247 CDD:275368 11/71 (15%)
zf-H2C2_2 239..264 CDD:463886 11/76 (14%)
C2H2 Zn finger 255..271 CDD:275368 4/15 (27%)
Blue background indicates that the domain is not in the aligned region.

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