DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad87A and Celsr3

DIOPT Version :10

Sequence 1:NP_731649.2 Gene:Cad87A / 41441 FlyBaseID:FBgn0037963 Length:1975 Species:Drosophila melanogaster
Sequence 2:NP_112610.1 Gene:Celsr3 / 83466 RGDID:621787 Length:3313 Species:Rattus norvegicus


Alignment Length:1197 Identity:298/1197 - (24%)
Similarity:476/1197 - (39%) Gaps:248/1197 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 TTFEARVKDVQDKPPVF-QGSLSTVIDEDSPINTLVLTVHARDGDTGEPRKIVYDLRTNPN---- 288
            :|.:||.:...::.|.| |.:..|::.|:....|.||.|.|:|.|.||..::||.|....|    
  Rat   300 STNQARSRRAANRHPQFPQYNYQTLVPENEAAGTAVLRVVAQDPDPGEAGRLVYSLAALMNSRSL 364

  Fly   289 DYFLLDAQTGELRTAKPLDREALEDSTGIISLVIRARELVNGVPSD--DPLTSATAKATVTIRDV 351
            :.|.:|.|:|.:|||..||||::|            |..:.....|  .|..|||....||:.|.
  Rat   365 ELFSIDPQSGLIRTAAALDRESME------------RHYLRVTAQDHGSPRLSATTMVAVTVADR 417

  Fly   352 NDSPPVFNHKEYSVSLLENTLPGTPLALDMSVSDADVGINSKFALRL-------DDVSGVFDVEP 409
            ||..|||...:|..:|.||...|.|: |.:..:|.|...|:....|.       ...:..|:::|
  Rat   418 NDHAPVFEQAQYRETLRENVEEGYPI-LQLRATDGDAPPNANLRYRFVGSPAARTAAAAAFEIDP 481

  Fly   410 K--LVTGYSQVNIRVANGTLDYENPNQRKFIVLVVAEETDTNPRLSSTATITVSVLDANDNKPVF 472
            :  |::         .:|.:|.|:....:.:|....:..:..|| |:|..:.::|||.|||.|.|
  Rat   482 RSGLIS---------TSGRVDREHMESYELVVEASDQGQEPGPR-SATVRVHITVLDENDNAPQF 536

  Fly   473 EQESYSASVSEAALPGQYIATITARDVDSGSYGDSGIRYS-LSGTGAELFHVNEQTGVISL---- 532
            .::.|.|.|.|...|...:..:||.|.|..:.|  .:.|: :||.....|.::..||.|.:    
  Rat   537 SEKRYVAQVREDVRPHTVVLRVTATDKDKDANG--LVHYNIISGNSRGHFAIDSLTGEIQVMAPL 599

  Fly   533 -----------ANCHDNGE---SNRR-----ERRDLNEDE----------HVEEDDGEGHLEMLS 568
                       ....|.|.   ||..     :..|:|:..          .|.|:...|| .::.
  Rat   600 DFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHSPIFVSTPFQVSVLENAPLGH-SVIH 663

  Fly   569 MEAATREIGTEPTVQYTLITQAPEEQASSVPLPAPVPHAAPSGVPAATANDDKAPQTCLDYESET 633
            ::|...:.|....::|:|     ...||..|.   |.::|...|..:      .|   ||.||..
  Rat   664 IQAVDADHGENSRLEYSL-----TGVASDTPF---VINSATGWVSVS------GP---LDRESVE 711

  Fly   634 TYFLSYKATDDNGRGSASVVSLRISVTDANDSPPVCESPLYRASVDEGAVVFDSPLIVKARDADT 698
            .||...:|.|......::..|:.::|.|.||:.|......|...::|.|.|..|.:.|.|.|.|.
  Rat   712 HYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDAAVGTSVVSVTAVDRDA 776

  Fly   699 MSRISYRIRGSEQVESIFDIDRETGQIIIRPNATLDVTNLNSDQLIFAVEANDGLFTAHCGVNIT 763
            .|.|||:|.|. ...:.|.|..:.|..::.....||.......:|:  :.|:|.....||.|:|.
  Rat   777 NSAISYQITGG-NTRNRFAISTQGGMGLVTLALPLDYKQERYFKLV--LTASDRALHDHCYVHIN 838

  Fly   764 VRDVNNHVPNFEQQSYSAVVEENSEIGTSVERVHATDLDTGKNAELRYRIQQGSFDDFGIVETTG 828
            :.|.|.|.|.|:...||..:.|:..:|::|..:.|:|.|.|:||.:.|.::. :...|.|...:|
  Rat   839 ITDANTHRPVFQSAHYSVSMNEDRPVGSTVVVISASDDDVGENARITYLLED-NLPQFRIDADSG 902

  Fly   829 EVFVSRKLDFDRRNTYQLQIQASDQGTPSLTGTATLTINVQNSNDKDPYFVPATQHAEVRADAPP 893
            .:.:...||::.:.||.|.|.|.|.|.|....|..:.:.|.:.||..|.||.:.....|..||||
  Rat   903 AITLQAPLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPP 967

  Fly   894 GQLVYTLIALDPDVANHNALEFAGTDDITAIDKEGKELPHYDQFKEYFKISRNGKVSVNKQLDRN 958
                                 |.....|:|.|::.               ..||:|....|    
  Rat   968 ---------------------FTSVLQISATDRDA---------------HANGRVQYTFQ---- 992

  Fly   959 LFAVMRINVLVTDSTAPNVQQGRGLLIIQIIDVNKNPPRFNAPWSVEQPQIKLQMVEEQPVGTVL 1023
                                                                             
  Rat   993 ----------------------------------------------------------------- 992

  Fly  1024 TTLQANDEDSSIGEFNISDNDYFAINQTSGMIYTIARLDYEVVKEVKFQVTVSDTGVPALTATAD 1088
                 |.||        .|.| |.|..|||::.|:.|||.|.|...:......|.|||.|.....
  Rat   993 -----NGED--------GDGD-FTIEPTSGIVRTVRRLDREAVPVYELTAYAVDRGVPPLRTPVS 1043

  Fly  1089 VVVDIINLNDNDPKFSQSDYYFNVTENSPRGTVAGKVEAHDGDVGVFGEITYTLI-GENNKYFSI 1152
            :.|.:.::|||.|.|...::...|.|||..|:|..::.|.|.|.|....|.|.:: |...:.|.:
  Rat  1044 IQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQITAVDPDDGPNAHIMYQIVEGNIPELFQM 1108

  Fly  1153 DAYTGNVMVANSSILDREQIKELTLSVVAQDKAPAAVQKSATATIHINILDVNDNAPVFT--RDV 1215
            |.::|.:.....  ||.|..:|..: ||....||..    :.||:|:.::|.|||:||..  :.:
  Rat  1109 DIFSGELTALID--LDYEARQEYVI-VVQATSAPLV----SRATVHVRLVDQNDNSPVLNNFQIL 1166

  Fly  1216 YNSTVAENAAYQPPAALLQVQAIDQD--EGLYGDVRYIITAGNEMGLFKLDAQSGIVYPAQSLSG 1278
            :|:.|:..:...|...:.::.|.|.|  :.|:    |....|||:.|..::..||.:..::.|..
  Rat  1167 FNNYVSNRSDTFPSGIIGRIPAYDPDVSDHLF----YSFERGNELQLLVVNQTSGELRLSRKLDN 1227

  Fly  1279 KHG-AYELTISARDTQGSGTMESTTKAII----------TVLRVNRHKPEFVIPALSNATIEIPG 1332
            ... ...:.::..|...|.|.:...:.:|          ||...|..:..|:.|.|.:....:..
  Rat  1228 NRPLVASMLVTVTDGLHSVTAQCVLRVVIITEELLANSLTVRLENMWQERFLSPLLGHFLEGVAA 1292

  Fly  1333 DIVQP--DYLLLTVRAMDNDTEENGKV 1357
            .:..|  |..:..::   |||:..|.|
  Rat  1293 VLATPTEDVFIFNIQ---NDTDVGGTV 1316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad87ANP_731649.2 Cadherin_repeat 33..128 CDD:206637
Cadherin_repeat 136..240 CDD:206637 3/10 (30%)
Cadherin_repeat 248..353 CDD:206637 36/110 (33%)
Cadherin_repeat 362..468 CDD:206637 26/114 (23%)
Cadherin_repeat 476..>533 CDD:206637 17/72 (24%)
CA_like <627..667 CDD:481204 13/39 (33%)
CA 692..772 CDD:214520 24/79 (30%)
Cadherin_repeat 778..873 CDD:206637 27/94 (29%)
Cadherin_repeat 882..994 CDD:206637 13/111 (12%)
Cadherin_repeat 1015..1099 CDD:206637 23/83 (28%)
Cadherin_repeat 1108..1207 CDD:206637 29/99 (29%)
Cadherin_repeat 1215..1314 CDD:206637 22/111 (20%)
Cadherin_repeat 1327..1427 CDD:206637 7/33 (21%)
Cadherin_repeat 1437..1549 CDD:206637
Cadherin_repeat 1557..1662 CDD:206637
Celsr3NP_112610.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 148..187
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 205..269
Cadherin_repeat 321..420 CDD:206637 37/110 (34%)
Cadherin_repeat 428..532 CDD:206637 26/114 (23%)
Cadherin_repeat 541..638 CDD:206637 23/98 (23%)
Cadherin_repeat 646..743 CDD:206637 27/114 (24%)
Cadherin_repeat 751..845 CDD:206637 29/96 (30%)
Cadherin_repeat 853..948 CDD:206637 28/95 (29%)
Cadherin_repeat 956..1054 CDD:206637 36/216 (17%)
Cadherin_repeat 1062..1156 CDD:206637 29/100 (29%)
Cadherin_repeat 1176..1257 CDD:206637 16/84 (19%)
EGF_CA 1428..1462 CDD:238011
EGF_CA 1472..1505 CDD:238011
LamG 1508..1691 CDD:238058
EGF_CA 1717..1748 CDD:238011
LamG 1755..1911 CDD:238058
EGF_CA 1939..1973 CDD:238011
EGF_CA 1973..2011 CDD:238011
Laminin_EGF <1994..2033 CDD:395007
EGF_Lam 2030..>2054 CDD:238012
EGF_Lam 2067..>2105 CDD:238012
HormR 2117..2181 CDD:214468
GAIN 2200..2448 CDD:465137
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2356..2395
GPS 2474..2527 CDD:197639
GPS. /evidence=ECO:0000255|PROSITE-ProRule:PRU00098 2478..2528
7tm_GPCRs 2534..2787 CDD:475119
TM helix 1 2537..2561 CDD:320659
TM helix 2 2570..2591 CDD:320659
TM helix 3 2601..2623 CDD:320659
TM helix 4 2642..2658 CDD:320659
TM helix 5 2677..2700 CDD:320659
TM helix 6 2723..2745 CDD:320659
TM helix 7 2749..2774 CDD:320659
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2887..2927
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2977..3004
Atrophin-1 <3089..>3311 CDD:460830
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 3091..3242
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 3255..3313
Blue background indicates that the domain is not in the aligned region.

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