DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad87A and pcdh10

DIOPT Version :10

Sequence 1:NP_731649.2 Gene:Cad87A / 41441 FlyBaseID:FBgn0037963 Length:1975 Species:Drosophila melanogaster
Sequence 2:XP_012820790.1 Gene:pcdh10 / 779938 XenbaseID:XB-GENE-5866461 Length:1010 Species:Xenopus tropicalis


Alignment Length:1086 Identity:238/1086 - (21%)
Similarity:406/1086 - (37%) Gaps:307/1086 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   637 LSYKATDDNGRGS--ASVV-SLRISVTDAND----SPPVCESPLYRASVDEGAVVFDSPLIVKAR 694
            |:||..::...|:  .::. .|.:.:|..::    :.|...:|....:::.|.:..:.       
 Frog    18 LAYKVQEERDHGTFVGNIAEDLGLDITKLSNRRFQTAPNSRTPYLELNLENGVLYVNE------- 75

  Fly   695 DADTMSRISYRIRGSEQVESIFDIDRETGQIIIRPNAT----LDVTNLNSDQLIFAVEANDGLFT 755
                                  .||||.   |.:.|.:    |:|. |.:....|.||       
 Frog    76 ----------------------KIDREQ---ICKQNPSCMLHLEVF-LENPLEFFRVE------- 107

  Fly   756 AHCGVNITVRDVNNHVPNFEQQSYSAVVEENSEIGTSVERVHATDLDTGKNAELRYRIQQGSFDD 820
                  |.|.|:|::.|.|.|......:.|::..||......|.|||.|.|:...|.|...|:  
 Frog   108 ------IEVLDINDNPPVFPQSDIQVEISESATPGTRFPLESAYDLDVGNNSLRTYEITTNSY-- 164

  Fly   821 FGI-VETTG------EVFVSRKLDFDRRNTYQLQIQASDQGTPSLTGTATLTINVQNSNDKDPYF 878
            |.: |:|.|      |:.:.::||.:::..::..:.|.|.|||..||||.|||.|.:|||..|.|
 Frog   165 FNLDVQTQGDGNKFAELVLKKQLDREQQALHRYVLTAIDGGTPQRTGTALLTIKVLDSNDNVPVF 229

  Fly   879 VPATQHAEVRADAPPGQLVYTLIALDPDVANHNALEFAGTDDITAIDKEGKELPHYDQFKEYFKI 943
            ........:..::|||.:|..|.|.|.|                    ||               
 Frog   230 EQQIYTVSLPENSPPGTMVIQLNATDQD--------------------EG--------------- 259

  Fly   944 SRNGKVSVNKQLDRNLFAVMRINVLVTDSTAPNVQQGRGLLIIQIIDVNKNPPRFNAPWSVEQPQ 1008
             :||:|..:                .:...:|.|:                              
 Frog   260 -QNGEVVYS----------------FSSHNSPKVR------------------------------ 277

  Fly  1009 IKLQMVEEQPVGTVLTTLQANDEDSSIGEFNISDNDYFAINQTSGMIYTIARLDYEVVKEVKFQV 1073
                                               |.|.|:..:|.|..|..||||.....:..|
 Frog   278 -----------------------------------DIFGIDPRTGRIEIIGELDYEDSGSYQVYV 307

  Fly  1074 TVSDTGVPALTATADVVVDIINLNDNDPKFSQSDYYFNVTENSPRGTVAGKVEAHDGDVGVFGEI 1138
            ...|.|..|:.....|:|.:::||||.|:.|.|....:|:|::..|||.......|.|....|:|
 Frog   308 QAKDLGPNAVPVHCKVLVKVLDLNDNPPEISFSTVKESVSESASPGTVVALFSVTDRDSEENGQI 372

  Fly  1139 TYTLIGENNKYFSIDAYTGNVMVANSSILDREQIKELTLSVVAQDKAPAAVQKSATATIHINILD 1203
            ...::|:......: :|.....:.....||||.:...|::|:|:|:....:  |:|.:|.:.:.|
 Frog   373 HCEILGDVPFRLKL-SYKNYYTIVTEGTLDREAMATYTVTVLARDRGTPPL--SSTKSIQVQVAD 434

  Fly  1204 VNDNAPVFTRDVYNSTVAENAAYQPPAALLQVQAIDQDEGLYGDVRYIITAGNEMGL-----FKL 1263
            ||||:|.||:.:||..|.||..  |.|.:..|.|.|:||....::.|.|...:..|:     ..:
 Frog   435 VNDNSPRFTQAIYNVYVIENNV--PGAYISAVSATDKDEEENANISYYILECDIQGMSVFTYVSI 497

  Fly  1264 DAQSGIVYPAQSLSGKHGAYE------LTISARDTQGSGTMESTTKAIITVLRV--NRHKPEFVI 1320
            ::::|.:|..::..     ||      ..:.|||   .||...::.|.:.::.|  |.:.|..|.
 Frog   498 NSENGYLYALRTFD-----YEQLKDFSFMVEARD---GGTPPLSSNATVNIIIVDQNDNAPAIVS 554

  Fly  1321 PALSNATI-EIPGDIVQPDYLLLTVRAMDNDTEENGKVSYHLQVNNRNEQQTGEFKIDEVTGELR 1384
            |...|.|. |......:|.||...|.|:|:|..||.:::|.:...|    ....|::|..|||||
 Frog   555 PQGRNGTAKEFLPRTAEPGYLFTRVVAVDSDEGENARLTYSILRGN----DMSLFRMDWRTGELR 615

  Fly  1385 AKTQLNRKNRAN--YDIILVARDAGNPPFESLRLLSVSIVDANENRPEFPDASNPYKVSINENSG 1447
            ...::..|...:  :::::..||.|.||..|..|:.|.|||::..|.                  
 Frog   616 TARKITNKRDPHRPFELVVEVRDHGQPPLSSTALIQVQIVDSSVERQ------------------ 662

  Fly  1448 RDVKIGHIQAASRSKHNR-DIFYYMLLGNEDGAFYVDKLTGDIYTNKSLDREETDVYTLYILASI 1511
                 |..|..|||.... |:...:::.....:|                        :::||.|
 Frog   663 -----GGEQRPSRSSDTALDLTLILIIALGSVSF------------------------IFLLAMI 698

  Fly  1512 KADLHISEEERASF----------------SIKTLNRDNTVAKVAITVLDVNDNPPVFEKPIYYA 1560
            ...:...:|::.:.                |.:...|...::|..|.::..::.|...:.|:..:
 Frog   699 VLAIRCQKEKKLNIYSCLASDCCMCCCSCCSRQARARKKKLSKSDIMLVQSSNVPSATQVPVEDS 763

  Fly  1561 GV------NANAKMGAAITLVNATDADQGKNAKIEFMIVASNLYKFGATKST-------GSIVPS 1612
            ..      |.|......:|         .::||.:.|.    |.....::||       |:|| :
 Frog   764 SSFGSHHHNQNYCYQVCLT---------PESAKTDLMF----LKPCSPSRSTDTEHNPCGAIV-T 814

  Fly  1613 PFAISQDGRISANTIMAEYNQDRFELEIVARELEQPQSSASTKVNI 1658
            .::..|...||..:|::..|:.|.||..:.....:..|||..:.:|
 Frog   815 GYSDQQPDIISNGSILSSENKQRTELSYLVDRPRRVNSSAFQEADI 860

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad87ANP_731649.2 Cadherin_repeat 33..128 CDD:206637
Cadherin_repeat 136..240 CDD:206637
Cadherin_repeat 248..353 CDD:206637
Cadherin_repeat 362..468 CDD:206637
Cadherin_repeat 476..>533 CDD:206637
CA_like <627..667 CDD:481204 6/36 (17%)
CA 692..772 CDD:214520 16/83 (19%)
Cadherin_repeat 778..873 CDD:206637 33/101 (33%)
Cadherin_repeat 882..994 CDD:206637 15/111 (14%)
Cadherin_repeat 1015..1099 CDD:206637 18/83 (22%)
Cadherin_repeat 1108..1207 CDD:206637 25/98 (26%)
Cadherin_repeat 1215..1314 CDD:206637 27/111 (24%)
Cadherin_repeat 1327..1427 CDD:206637 32/102 (31%)
Cadherin_repeat 1437..1549 CDD:206637 15/128 (12%)
Cadherin_repeat 1557..1662 CDD:206637 24/115 (21%)
pcdh10XP_012820790.1 Cadherin_2 17..99 CDD:462413 18/113 (16%)
Cadherin_repeat 125..225 CDD:206637 34/101 (34%)
Cadherin_repeat 233..333 CDD:206637 33/216 (15%)
Cadherin_repeat 345..438 CDD:206637 25/95 (26%)
Cadherin_repeat 446..548 CDD:206637 27/111 (24%)
Cadherin_repeat 566..656 CDD:206637 28/93 (30%)
Cadherin_C_2 677..794 CDD:465139 18/153 (12%)
Blue background indicates that the domain is not in the aligned region.

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