Sequence 1: | NP_731649.2 | Gene: | Cad87A / 41441 | FlyBaseID: | FBgn0037963 | Length: | 1975 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038955032.1 | Gene: | Pcdh15 / 690865 | RGDID: | 1590969 | Length: | 1940 | Species: | Rattus norvegicus |
Alignment Length: | 1668 | Identity: | 417/1668 - (25%) |
---|---|---|---|
Similarity: | 652/1668 - (39%) | Gaps: | 426/1668 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 242 PPVFQGSLSTVIDEDSPINTLVLTVHARDGDTGEP-RKIVYDLRTNPNDYFLLDAQTGEL---RT 302
Fly 303 AKPLDREALEDSTGIISLVIRARELVNGVPSDDPLTSATAKATVTIRDVNDSPPVFNHKEYSVSL 367
Fly 368 LENTLPGTPL----ALDMSVSDADVGINSKFALRL-----DDVSG-VFDVEPKLVTGYSQVNIRV 422
Fly 423 ANGTLDYENPNQRKFIVLVVAEE--TDTNPRLSSTATITVSVLDANDNKPVF------------E 473
Fly 474 QESYSASVSEAALPGQ---YIAT--ITARDVDSGSYGDS---GIRYS-LSGTGAE---LFHVNEQ 526
Fly 527 TGVISLANCHDNGESNRRERRDLNEDEHVEEDDGEGHLEMLSMEAATREIGTEPTVQYTLITQAP 591
Fly 592 EEQASSVPLPAPVPHAAPSGVPAATANDDKAPQTCLDYESETTYFLSYKATDDNGRGSASVVSLR 656
Fly 657 ISVTDANDSPPVCESPLYRASVDE----GAVVFDS-----PLIVKARDADTMSRISYRIRGSEQV 712
Fly 713 ESIFDIDRETGQIIIRPNA-----TL--DVTNLNSDQLIFAVEANDGLFTAH-CGVNITVRDVNN 769
Fly 770 HVPNFEQQSYSAVVEENSEIGTSVERVHATDLDTGKNAELRYRIQQGSFDDFGIVETTGEVFVSR 834
Fly 835 KLDFDRRNTYQLQIQASDQGTPSLTGTATLTINVQNSNDKDPYFVPATQHAEVRADAPPGQLVYT 899
Fly 900 LIALDPDVANHNALEFAGTDDITAIDKEGKELPHYDQFKEYFKISRNGKVSVNKQLDRNLFAVMR 964
Fly 965 INVLVTDSTAPNVQQGRGLLIIQIIDVNKNPPRFNAPWSVEQPQI--KLQMVEEQPVGTVLTTLQ 1027
Fly 1028 ANDEDSSIGEFNISDND---YFAINQTSGMIYTIARLDYEVVKEVKFQVTVSDTGVPALTATADV 1089
Fly 1090 VVDIINLNDNDPKFSQSDYY----FNVTENSPRGTVAGKVEAHDGDVGVFGEITYTLIGENNKYF 1150
Fly 1151 SIDAYTGNVMVANSSILDREQIKELTLSVVAQDKAPAAVQKSATATIHINILDVNDNAPVFTRDV 1215
Fly 1216 YNSTVAENAAYQPPA--ALLQVQAIDQDEGLYGDVRYIITAGNEMGLFKLDAQSGIVYPAQSLS- 1277
Fly 1278 ----GKHGAYELTISARDTQGSGTMESTTKAIITVLR-VNRHKPEFVIPALSNATIEIPGDIVQP 1337
Fly 1338 DYL----LLTVRAMDNDTE--ENGKVSYHLQVNNRNEQQTGEFKIDEVTGELRAKTQLNRKNRAN 1396
Fly 1397 YDIILVARDAGNPPFESLRLLSVSIVDANENRPEFPDASNPYK-VSINENSGRDVKIGHIQAASR 1460
Fly 1461 SKHNRDIFYYMLLGNEDGAFYVDKLTGDIYTNKSLDREETDVYTLYILAS----IKADLHISEEE 1521
Fly 1522 RASFSIKTLNRDNTVAKVAITVLDVNDNPPVFEKPIYYAGVNANAKMGAAITLVNATDADQGKNA 1586
Fly 1587 KIEFMIVASNLYK----FGATKSTGSIVPSPFAISQDGRISANTIMAEYNQDR--FELEIVAREL 1645
Fly 1646 EQPQSSASTKVNIWVFDGTQL-VRVILSR-PPEEVYQEQEEIIAELRNATQH-----RIIVDEI- 1702
Fly 1703 -RFHLDSIGRIRMDWCDLYFHAVDPQTQQIAPVDEILKDID-RNYDYLKD---YY--AGFAIENV 1760
Fly 1761 VPAYIAIVQ---DEFDLAVAGLVALVIVLFVGVISFIVLCCCL 1800 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Cad87A | NP_731649.2 | Cadherin_repeat | 33..128 | CDD:206637 | |
Cadherin_repeat | 136..240 | CDD:206637 | |||
Cadherin_repeat | 248..353 | CDD:206637 | 27/108 (25%) | ||
Cadherin_repeat | 362..468 | CDD:206637 | 33/117 (28%) | ||
Cadherin_repeat | 476..>533 | CDD:206637 | 19/68 (28%) | ||
E_set | <627..667 | CDD:298831 | 11/39 (28%) | ||
CA | 692..772 | CDD:214520 | 20/87 (23%) | ||
Cadherin_repeat | 778..873 | CDD:206637 | 30/94 (32%) | ||
Cadherin_repeat | 882..994 | CDD:206637 | 10/111 (9%) | ||
Cadherin_repeat | 1015..1099 | CDD:206637 | 27/86 (31%) | ||
Cadherin_repeat | 1108..1207 | CDD:206637 | 33/102 (32%) | ||
Cadherin_repeat | 1215..1314 | CDD:206637 | 28/106 (26%) | ||
Cadherin_repeat | 1327..1427 | CDD:206637 | 22/105 (21%) | ||
Cadherin_repeat | 1437..1549 | CDD:206637 | 36/116 (31%) | ||
Cadherin_repeat | 1557..1662 | CDD:206637 | 24/110 (22%) | ||
Pcdh15 | XP_038955032.1 | ECD | 36..145 | CDD:408229 | 28/112 (25%) |
Cadherin_repeat | 156..245 | CDD:206637 | 24/96 (25%) | ||
CA | 310..398 | CDD:214520 | 29/178 (16%) | ||
Cadherin_repeat | 404..510 | CDD:206637 | 27/113 (24%) | ||
Cadherin_repeat | 518..614 | CDD:206637 | 37/197 (19%) | ||
Cadherin_repeat | 626..718 | CDD:206637 | 28/92 (30%) | ||
Cadherin_repeat | 727..820 | CDD:206637 | 32/99 (32%) | ||
Cadherin_repeat | 828..926 | CDD:206637 | 27/105 (26%) | ||
Cadherin_repeat | 935..1032 | CDD:206637 | 22/97 (23%) | ||
Cadherin_repeat | 1050..1145 | CDD:206637 | 35/110 (32%) | ||
Cadherin_repeat | 1154..1248 | CDD:206637 | 24/110 (22%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |