DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cad87A and Pcdha2

DIOPT Version :10

Sequence 1:NP_731649.2 Gene:Cad87A / 41441 FlyBaseID:FBgn0037963 Length:1975 Species:Drosophila melanogaster
Sequence 2:NP_932785.1 Gene:Pcdha2 / 353234 MGIID:2681880 Length:948 Species:Mus musculus


Alignment Length:968 Identity:223/968 - (23%)
Similarity:366/968 - (37%) Gaps:262/968 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   890 DAPPGQLVYTLIALDPDVANHNALEFAG--TDDITAIDKEGKELPHYDQFKEYFKIS-------- 944
            :|..|||.|::    |:.|.|..  |.|  ..|:      |.||.  :.....|:::        
Mouse    25 EAGNGQLHYSV----PEEAKHGT--FVGRIAQDL------GLELT--ELVPRLFRVASKDRGDLL 75

  Fly   945 ----RNGKVSVNKQLD------RNLFAVMRINVLVTDSTAPNVQQGRGLLI----IQIIDVNKNP 995
                :||.:.||.::|      |:....:.:.|:|          .|.|.:    :::.|:|.||
Mouse    76 EVNLQNGILFVNSRIDREELCGRSAECSIHLEVIV----------DRPLQVFHVEVEVRDINDNP 130

  Fly   996 PRFNAPWSVEQPQIKLQMVEEQPVGTVLTTLQANDEDSSIG---EFNISDNDYFAIN-QTS---- 1052
            |||      ...:..:|..|.:.:.:......|:|.|..:.   .:.:|.::.|.:: |||    
Mouse   131 PRF------PMTEKTIQFSESRSLDSRFPLEGASDADIGVNALLSYKLSPSELFFLDVQTSDELS 189

  Fly  1053 -GMIYTIAR-LDYEVVKEVKFQVTVSDTGVPALTATADVVVDIINLNDNDPKFSQSDYYFNVTEN 1115
             .:...:.: ||.|...|||..:..:|.|.|.||.|..:::.::::|||:|.|.||.|...:.||
Mouse   190 QSLFLVLGKSLDREEDAEVKLLLVATDGGKPELTGTVQILIKVLDVNDNEPTFPQSVYKVQLLEN 254

  Fly  1116 SPRGTVAGKVEAHDGDVGVFGEITYTLIGE----NNKYFSIDAYTGNVMVANSSILDREQIKELT 1176
            :..||:..|:.|.|.|.|...||.|:|..:    ....|.||..:|.|.....  ||.|:.....
Mouse   255 TANGTLVMKLNASDADEGSNSEIVYSLGSDVSSTTRTKFQIDPNSGEVRTKGE--LDYEERTSYE 317

  Fly  1177 LSVVAQDKAPAAVQKSATATIHINILDVNDNAPVFTRDVYNSTVAENAAYQPPAALLQVQAIDQD 1241
            :.|:|.||...|:  |....|.:.::|:|||.|..:....:..|.|||......||:.|.  |:|
Mouse   318 IQVIASDKGTPAM--SGHCKISVKLVDINDNTPEVSITSLSLPVQENAPLGAVIALISVS--DRD 378

  Fly  1242 EGLYGDV----------RYIITAGNEMGLFKLDAQSGIVYPAQSLSGKHGA-YELTISARDTQGS 1295
            .|:.|.|          :.:.|..|...|. ||:         :|..:..| |::.::||| .||
Mouse   379 SGVNGQVTCSLSPHVPFKLVSTFKNYYSLV-LDS---------ALDREATADYKVMVTARD-GGS 432

  Fly  1296 GTMESTTKAIITVLRVNRHKPEFVIPALSNATIEIPGDIVQPDYL------------LLTVRAMD 1348
            .::.:|....:.|..||.:.|.|                .||:|.            :.||.|||
Mouse   433 PSLRATASVSVEVADVNDNAPVF----------------AQPEYTVFVKENNPPGAHIFTVSAMD 481

  Fly  1349 NDTEENGKVSYHLQVNNRNEQQTGE------FKIDEVTGELRAKTQLNRKNRANYDIILVARDAG 1407
            .|.:||..|||.|.     |::.||      ..:...:|::.|...|:.:........:.|||||
Mouse   482 ADAQENALVSYSLV-----ERRVGERLLSSYVSVHAESGKVFALQPLDHEELELLQFQVTARDAG 541

  Fly  1408 NPPFESLRLLSVSIVDANENRP-EFPDASNPYKVSINENSGRDVKIGHIQAASRSKHNRDIFYYM 1471
            .|...|...|.|.::|.|:|.| ..|..:.....|::|...|.|..||:....|:. :.|..|..
Mouse   542 VPALGSNVTLQVFVLDENDNAPLLLPQGAVGVGGSVSELVPRSVGSGHVVTKVRAV-DADSGYNA 605

  Fly  1472 LLGNE-------DGAFYVDKLTGDIYTNKSLDREETDVYTLYILASIKADLHISEEERASFSIKT 1529
            .|..|       ...|.|...||:|.|.::||..:.....|.:|        :.:....|.:   
Mouse   606 WLSYELQSTVGMRSLFRVGLYTGEISTTRALDEVDAPRQRLLVL--------VKDHGEPSLT--- 659

  Fly  1530 LNRDNTVAKVAITVLDVNDNPPVFEKPIYYAG------VNANAKMGAAITLVNATDADQGKNAKI 1588
                 ..|.|.:::::.:..|....:.:..|.      |..|..:..||..|::           
Mouse   660 -----ATATVLVSLVENSQAPKTSSRALVDAAGQEASLVTVNVYLVIAICAVSS----------- 708

  Fly  1589 EFMIVASNLY---KFGATKSTGSIVPSPFAISQDGRISANTIMAEYNQDRFELEIVARELEQPQS 1650
             .:::...||   :..|..:.|:..|        ||                          |..
Mouse   709 -LLVLTLLLYTALRCSAMPTDGACAP--------GR--------------------------PML 738

  Fly  1651 SASTKVNIWVFDGTQLVRVI----------------LSRPPEEVYQEQEEIIAE----------- 1688
            ..|:.|..|.:...:..||.                ||:.||...:.|..:.||           
Mouse   739 VCSSAVGSWSYSQQRRQRVCSGEGPPKTDLMAFSPSLSQGPESAEERQPPLEAEYLGKPRQPNPD 803

  Fly  1689 ------LRNATQHRIIVDEIRFHLDSIGRIR-------MDWCDLYFHAVDPQTQQIAP 1733
                  || |..|..:      ||:..|.:|       ..|..:.....:|:..:::|
Mouse   804 WRYSASLR-AGMHSSV------HLEEAGILRAGPGGPDQQWPTVSSATPEPEAGEVSP 854

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad87ANP_731649.2 Cadherin_repeat 33..128 CDD:206637
Cadherin_repeat 136..240 CDD:206637
Cadherin_repeat 248..353 CDD:206637
Cadherin_repeat 362..468 CDD:206637
Cadherin_repeat 476..>533 CDD:206637
CA_like <627..667 CDD:481204
CA 692..772 CDD:214520
Cadherin_repeat 778..873 CDD:206637
Cadherin_repeat 882..994 CDD:206637 27/127 (21%)
Cadherin_repeat 1015..1099 CDD:206637 22/93 (24%)
Cadherin_repeat 1108..1207 CDD:206637 31/102 (30%)
Cadherin_repeat 1215..1314 CDD:206637 29/109 (27%)
Cadherin_repeat 1327..1427 CDD:206637 32/117 (27%)
Cadherin_repeat 1437..1549 CDD:206637 24/118 (20%)
Cadherin_repeat 1557..1662 CDD:206637 17/113 (15%)
Pcdha2NP_932785.1 Cadherin_2 30..111 CDD:462413 21/104 (20%)
Cadherin_repeat 139..238 CDD:206637 23/98 (23%)
Cadherin_repeat 246..346 CDD:206637 31/103 (30%)
Cadherin_repeat 354..451 CDD:206637 29/109 (27%)
Cadherin_repeat 459..561 CDD:206637 30/106 (28%)
Cadherin_repeat 581..669 CDD:206637 22/104 (21%)
Cadherin_tail 798..914 CDD:435046 11/64 (17%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.