DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad87A and pcdh8

DIOPT Version :10

Sequence 1:NP_731649.2 Gene:Cad87A / 41441 FlyBaseID:FBgn0037963 Length:1975 Species:Drosophila melanogaster
Sequence 2:XP_073767684.1 Gene:pcdh8 / 30456 ZFINID:ZDB-GENE-980526-242 Length:963 Species:Danio rerio


Alignment Length:702 Identity:186/702 - (26%)
Similarity:296/702 - (42%) Gaps:115/702 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   785 ENSEIGTSVERVHATDL--DTGKNAELRYRIQQ--GSFDDF----GIVETTGEVFVSRKL----- 836
            |....||.:..: :.||  |..::.|..::..|  .|..|.    |:: |.|||....||     
Zfish    41 EEDATGTEIGNL-SQDLKIDPSEDPETSFKFIQTSNSIIDMRQMDGLL-TVGEVIDREKLCQRSP 103

  Fly   837 ----DFD----RRNTYQLQIQASDQGTPSLTGTATLTINVQNSNDKDPYFVPATQHAEVRADAPP 893
                .||    .:..:||               ..:.|.|::.||..|.|.....|.::..|||.
Zfish   104 QCLITFDVVAFSKEKFQL---------------IHVEIEVKDINDHSPQFTRNETHLDISEDAPL 153

  Fly   894 GQLVYTLIALDPDVANHNALEFAGTDDITAIDKEGKELPHYDQFKEYFKISRNGKVSVN----KQ 954
            .......:|:|.||.::....:              .:.|...|........:|:.|..    |.
Zfish   154 NSRFPLDVAVDHDVGDNYIQSY--------------HISHNSHFVVEVSTREDGEKSAELVLIKS 204

  Fly   955 LDRNLFAVMRINVLVTDSTAPNVQQGRGLLIIQIIDVNKNPPRFNAPWSVEQPQIKLQMVEEQPV 1019
            |||.......|.|..||..||. :.|...|.|:::|.|.|.|.|      |...:|:::.|:.|:
Zfish   205 LDRETEDFYTIEVTATDGGAPQ-KSGSTTLYIRVLDFNDNSPTF------EHSSLKVELSEDSPI 262

  Fly  1020 GTVLTTLQANDEDSSI-GE--FNISDND------YFAINQTSGMIYTIARLDYEVVKEVKFQVTV 1075
            |:.:..:.|.|.|:.| ||  :...:..      .|.|:..||.:.....:|||..|..:..:..
Zfish   263 GSRVLKVHAFDPDAGINGEIVYGFVEGSPSEVTRVFQIDLISGEVTLKDIVDYETKKSYELHIQA 327

  Fly  1076 SDTGVPALTATADVVVDIINLNDNDPKF------SQSDYYFNVTENSPRGTVAGKVEAHDGDVGV 1134
            ||.|..::::|...:||||::|||.|:.      |.||....:||.:...:....:...|.|.|.
Zfish   328 SDLGANSVSSTCRAIVDIIDVNDNAPEIIIKPMTSTSDGVAFITEAAAEESFVALISTSDKDSGP 392

  Fly  1135 FGEITYTLIGENNKYFSI-DAYTGNVMVANSSILDREQIKELTLSVVAQD--KAPAAVQKSATAT 1196
            .|.:..:|  |.:::|.: .||:...|:..::.||||.|.|..|:|:::|  ..|....|..|  
Zfish   393 NGYVRTSL--EGHEHFKLQQAYSDTFMIITTTTLDRESISEYNLTVISEDLGTPPFKTVKHYT-- 453

  Fly  1197 IHINILDVNDNAPVFTRDVYNSTVAENAAYQPPAALLQVQAIDQDEGLYGDVRYIITA-----GN 1256
              |.|.|.|||.|:|::.:|:.:|.||..  |.:.:..|.|.|.|.|..|.|.|.:..     |:
Zfish   454 --IRITDENDNPPLFSKSIYDVSVIENNI--PGSYMTTVVARDLDAGKNGKVSYSLVESKAPDGS 514

  Fly  1257 EMGLF-KLDAQSGIVYPAQSLSGKHGAYE------LTISARDTQGSGTMESTTKAIITVLRVNRH 1314
            .:..| .:|..||.:|..:|..     :|      .::.|.| :|..::.|||...:.|:..|.:
Zfish   515 SISTFVSVDPHSGSLYTLRSFD-----FETLKDVQFSVKATD-KGFPSLSSTTLIQVRVVDDNDN 573

  Fly  1315 KPEFVIPALSNATIEIPGDI-VQPDYLLLTVRAMDNDTEENGKVSYHLQVNNRNEQQTGEFKIDE 1378
            .|.|..|.|.|.:.|||..: ....||.|.|.|.|.|:..|.:::||:.     |.:...|.||:
Zfish   574 FPYFTYPVLRNNSAEIPIPMNANAGYLALKVAAKDEDSGINSELNYHIL-----EDEAKLFSIDK 633

  Fly  1379 VTGELRAKTQLNRKNRANYDIILVARDAGNPPFESLRLLSVSIVD--ANENR 1428
            .|||:..|.:|.........|.:...|....|..|...:...:.|  |.|::
Zfish   634 NTGEIILKRKLTASCGEILQIYVSVVDGAREPLSSSANIRFIVTDTGAQEDQ 685

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad87ANP_731649.2 Cadherin_repeat 33..128 CDD:206637
Cadherin_repeat 136..240 CDD:206637
Cadherin_repeat 248..353 CDD:206637
Cadherin_repeat 362..468 CDD:206637
Cadherin_repeat 476..>533 CDD:206637
CA_like <627..667 CDD:481204
CA 692..772 CDD:214520
Cadherin_repeat 778..873 CDD:206637 23/108 (21%)
Cadherin_repeat 882..994 CDD:206637 27/115 (23%)
Cadherin_repeat 1015..1099 CDD:206637 26/92 (28%)
Cadherin_repeat 1108..1207 CDD:206637 28/101 (28%)
Cadherin_repeat 1215..1314 CDD:206637 29/110 (26%)
Cadherin_repeat 1327..1427 CDD:206637 28/102 (27%)
Cadherin_repeat 1437..1549 CDD:206637
Cadherin_repeat 1557..1662 CDD:206637
pcdh8XP_073767684.1 None
Blue background indicates that the domain is not in the aligned region.

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