DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad87A and Pcdh11x

DIOPT Version :10

Sequence 1:NP_731649.2 Gene:Cad87A / 41441 FlyBaseID:FBgn0037963 Length:1975 Species:Drosophila melanogaster
Sequence 2:XP_006528450.1 Gene:Pcdh11x / 245578 MGIID:2442849 Length:1360 Species:Mus musculus


Alignment Length:1097 Identity:265/1097 - (24%)
Similarity:449/1097 - (40%) Gaps:197/1097 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   706 IRGSEQVESIFD----IDRETGQIIIRPNATLDVTNLNSDQLIFAVEA---NDGLFTAHCGVNIT 763
            ||..|....||.    ||||.    :.....||.      :..:.||.   .|.:|.. ..:...
Mouse   105 IRIEEGTGEIFTTGARIDREK----LCAGIVLDA------RCFYEVEVAVLPDEIFRL-VKIRFL 158

  Fly   764 VRDVNNHVPNFEQQSYSAVVEENSEIGTSVERVHATDLDTGKNAELRYRIQQGSFDDFG--IVET 826
            :.|:|::.|.|.....:..:.|||.|.:......|.|.|.|.|....|::.: |.:.||  ::||
Mouse   159 IEDINDNAPLFPTTVINISIPENSAINSRYSLPAAIDPDIGINGVQNYQLIK-SQNIFGLDVIET 222

  Fly   827 -----TGEVFVSRKLDFDRRNTYQLQIQASDQGTPSLTGTATLTINVQNSNDKDPYFVPATQHAE 886
                 ..::.|.::||.:.::||.::::..|.|.|..:.||.|.::|.::||..|.|:.......
Mouse   223 PEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPIFIEKEIEVS 287

  Fly   887 VRADAPPGQLVYTLIALDPDVANHNALEFAGTDDITAIDKEGKELPHYDQFKEYFKISRNGKVSV 951
            :..:||.|..|..|.|.|.|:..:..:.|..::.::.|   .|.|.|.:        :..|.::|
Mouse   288 IPENAPIGSSVTQLHATDADIGENARIHFYFSNLVSNI---AKRLFHLN--------TTTGLITV 341

  Fly   952 NKQLDRNLFAVMRINVLVTD-STAPNVQQGRGLLIIQIIDVNKNPPRFNAPWSVEQPQIKLQMVE 1015
            .:.|||......::.||.|| .:.|    .|..:::.:.|:|.|.|..:..:.|......:.:.|
Mouse   342 KEPLDREESPSHKLLVLATDGGSTP----ARATVLVNVTDINDNVPSIDIRYIVNPTNGTVLLSE 402

  Fly  1016 EQPVGTVLTTLQANDEDSSIGEFN-----ISDNDY-FAI-----NQTSGMIYTIARLDYEVVKEV 1069
            ..|:.|.:..:...|:||   |.|     .:|::. |.:     ||.  ::.|.|.||:|..:|.
Mouse   403 NAPLNTKIALITVMDKDS---EHNGRVTCFTDHEVPFRLRPVFSNQF--LLETAAFLDFESTREY 462

  Fly  1070 KFQVTVSDTGVPALTATADVVVDIINLNDNDPKFSQSDYYFNVTENSPRGTVAGKVEAHDGDVGV 1134
            ..::..:|.|.|.|..::.:::.:.:.|||.|.|:||....:|.||:..|....|:.|.|.|.|.
Mouse   463 AIKLLAADAGKPPLNQSSMLLIKVKDENDNAPVFTQSFISLSVPENNSPGAQLTKISATDADSGQ 527

  Fly  1135 FGEITYTLIGENNKYFSIDAYTGNVMVANSSILDREQIKELTLSVVAQDKAPAAVQKSATATIHI 1199
            ..||:|.|..:....|::|..||.:.....  ||||:.::...:|:|||.....:.  :.||:.:
Mouse   528 NAEISYMLGFDAPPEFNLDQRTGILTAVKK--LDREKQEKYYFTVLAQDNGIPPLM--SNATVFV 588

  Fly  1200 NILDVNDNAPVFTRDVYNSTVAENAAYQPPAALLQVQAIDQDEGLYGDVRYIITAGNEMGLFKLD 1264
            .:||.|||:|:||.:.||..|.|:........|:.|  .|.|.|....|...|...|:.  |.:|
Mouse   589 TVLDQNDNSPIFTHNEYNFYVPESLPKHGTVGLITV--TDPDYGENSAVTLSILDVNDQ--FTID 649

  Fly  1265 AQSGIVYPAQSLS-GKHGAYELTISARDTQGSGTMESTTKAIITVLRVNRHKPEFVIPALSNATI 1328
            .|||::.|..|.. .:..:|...:.|.| .|..:..||.:..|.|:.||.:||.|:.|. ||.:.
Mouse   650 PQSGVIRPNISFDRERQESYTFYVKAED-GGRVSRSSTARVTINVVDVNDNKPIFIDPP-SNYSF 712

  Fly  1329 EIPGDIVQPDYLLLTVRAMDNDTEENGKVSYHLQVNNRNEQQTGEFKIDEVTGELRAKTQLNRKN 1393
            |.......|..::..|.|:|:|...|.:|.|.:...|..    |.|.|::.:|.:..|.:....:
Mouse   713 EWVLPSTNPGTVVFKVVAIDDDIGMNAEVLYSIVGGNTK----GLFMIEQTSGNITLKEKCMVSD 773

  Fly  1394 RANYDIILVARDAGNPPFESL-RLLSVSIVDANENRPEFPDASNPYKV---SI----NENSGRDV 1450
            ...:.:|:.|.|.|.|  :|| .:::|:.. .||:   .|:|:..|::   ||    |:|:    
Mouse   774 LGLHRVIVKANDLGQP--DSLFNVVNVNFF-INES---VPNATLIYELVRRSIDAPANQNT---- 828

  Fly  1451 KIGHIQAASRSKHNRDIFYYMLLGNEDGAFYVDKLTGDIYTNKSLDREETDVYTLYILASIKA-- 1513
                 :..|.|....|....|          |..:.|.|          |.|..::|.|.::.  
Mouse   829 -----ETTSASSPTTDYVKIM----------VAIVAGTI----------TVVLVIFITAVVRCRQ 868

  Fly  1514 --DLHISEEERASFSIKTLNRDN-TVAKVAITVLDVNDNPPVFEKPIYYAGVNANAKMGAAITLV 1575
              .|..|::.:.:....|.|.:| .:..:.........:||                        
Mouse   869 PPHLKASQKNKQNSEWVTPNPENRQMIMMKKKKKKKKKHPP------------------------ 909

  Fly  1576 NATDADQGKNAKIEFMIVASNLYKFGATKSTGSIVPSPFAISQDGRISANTIMAEYNQDRFELEI 1640
                    ||..:.|:.:..                   |...||....|::       ..:|.|
Mouse   910 --------KNLLLNFVTIEE-------------------AKPDDGENERNSV-------TLDLPI 940

  Fly  1641 VARELEQPQSSASTKVNIWVFDGTQLVRVILSRPPEEVYQEQEEIIAELRNATQHRII----VDE 1701
            ...|....:.:..|....:..|...|.|...|..|:..:|.|.|....    ::|.||    :|.
Mouse   941 ELEEQTMGKYNWGTTPTTFKPDSPDLARHYKSASPQPAFQIQPETPLN----SKHHIIQELPLDN 1001

  Fly  1702 IRFHLDSIGRIRMDWCDLYFHAVD----PQTQQIAPVD----EILKDIDRNYDYLKD 1750
            .....|||.:......|.|  :|.    |.|...|||.    ..:|::.|::..:|:
Mouse  1002 TFVGCDSISKCSSSSSDPY--SVSECSYPVTTFKAPVSVHIRPTMKEVVRSHTPMKE 1056

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad87ANP_731649.2 Cadherin_repeat 33..128 CDD:206637
Cadherin_repeat 136..240 CDD:206637
Cadherin_repeat 248..353 CDD:206637
Cadherin_repeat 362..468 CDD:206637
Cadherin_repeat 476..>533 CDD:206637
CA_like <627..667 CDD:481204
CA 692..772 CDD:214520 17/72 (24%)
Cadherin_repeat 778..873 CDD:206637 27/101 (27%)
Cadherin_repeat 882..994 CDD:206637 26/112 (23%)
Cadherin_repeat 1015..1099 CDD:206637 23/94 (24%)
Cadherin_repeat 1108..1207 CDD:206637 30/98 (31%)
Cadherin_repeat 1215..1314 CDD:206637 29/99 (29%)
Cadherin_repeat 1327..1427 CDD:206637 24/100 (24%)
Cadherin_repeat 1437..1549 CDD:206637 21/123 (17%)
Cadherin_repeat 1557..1662 CDD:206637 11/104 (11%)
Pcdh11xXP_006528450.1 Cadherin_2 58..129 CDD:462413 9/27 (33%)
Cadherin_repeat 173..275 CDD:206637 28/102 (27%)
Cadherin_repeat 283..381 CDD:206637 26/112 (23%)
CA 414..494 CDD:214520 22/84 (26%)
Cadherin_repeat 501..596 CDD:206637 30/98 (31%)
Cadherin_repeat 604..699 CDD:206637 29/99 (29%)
Cadherin_repeat 710..802 CDD:206637 23/98 (23%)
Protocadherin 805..1007 CDD:462451 48/295 (16%)
FAM47 <1178..1253 CDD:405345
Blue background indicates that the domain is not in the aligned region.

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