DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad87A and Cdh23

DIOPT Version :9

Sequence 1:NP_731649.2 Gene:Cad87A / 41441 FlyBaseID:FBgn0037963 Length:1975 Species:Drosophila melanogaster
Sequence 2:XP_017169419.1 Gene:Cdh23 / 22295 MGIID:1890219 Length:3361 Species:Mus musculus


Alignment Length:2085 Identity:562/2085 - (26%)
Similarity:916/2085 - (43%) Gaps:363/2085 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 PVFT-QTLNNIILYENVTVGTVVFRLEAYDP---EGSPVTYGAI-GAD-HFSVDPVSGNITLIKP 83
            |||| |..|.:.|.|...:||.|..:.|.|.   :|..|.|..: ||: .|.:|..:|.|..:..
Mouse  1213 PVFTQQQYNRLGLRETAGIGTSVIVVRATDKDTGDGGLVNYRILSGAEGKFEIDESTGLIVTVDY 1277

  Fly    84 LDREEKDTLKFLVSIRDRVDPEGESERDNVVEVPITFIILDLNDNPPEFQNTPYEADVNEDAAVG 148
            ||.|.|.:....||..|...|..:    ....|.:|  :|:..|...:|.|..|||.:.|:.|:|
Mouse  1278 LDYETKTSYLMNVSATDGAPPFNQ----GFCSVYVT--LLNELDEAVQFSNASYEAVIMENLALG 1336

  Fly   149 TTI--FDKITVKDRDIVGESLDLKCLPQQQSPEACRKFRLHIIKRDATILEAAVVLNDTLNYNQR 211
            |.|  ....::.:.:.:....|.....|.::          :.|.||  :...:.:...::..:.
Mouse  1337 TEIVRVQAYSIDNLNQITYRFDAYTSAQAKA----------LFKIDA--ITGVITVKGLVDREKG 1389

  Fly   212 MVYHFQIEATDGPHKTQTTFEA--RVKDVQDKPPVFQGSLSTVID--EDSPINTLVLTVHARDGD 272
            ..|...:.|.||..|..:|.:.  .|.|..|..|.|..:..:.|.  ||.|:...|.||.|||.|
Mouse  1390 DFYTLTVVADDGGPKVDSTVKVYITVLDENDNSPRFDFTSDSAISVPEDCPVGQRVATVKARDPD 1454

  Fly   273 TGEPRKIVYDLRT----------NPNDYFLLDAQTGELRTAKPLDREALEDSTGIISLVIRAREL 327
            .|...::|:.|.:          ..||      ..||:..|||||||.|:..  |:.:|...|  
Mouse  1455 AGSNGQVVFSLASGNIAGAFEIITSND------SIGEVFVAKPLDREELDHY--ILKVVASDR-- 1509

  Fly   328 VNGVP---SDDPLTSATAKATVTIRDVNDSPPVFNHK-EYSVSLLENTLPGTPLALDMSVSDADV 388
              |.|   .|..|       .|||.||||:|||.... .|:||:.||...||.: :.:..:|.|:
Mouse  1510 --GTPPRKKDHIL-------QVTILDVNDNPPVIESPFGYNVSVNENVGGGTSV-VQVRATDRDI 1564

  Fly   389 GINS-----------KFALRLDDVSGVFDVEPKLVTGYSQVNIRVANGTLDYENPNQRKFIVLVV 442
            ||||           ....|:|.:||.....|               ...|.|..|   |..|||
Mouse  1565 GINSVLSYYITEGNEDMTFRMDRISGEIATRP---------------APPDRERQN---FYHLVV 1611

  Fly   443 AEETDTNPRLSSTATITVSVLDANDNKPVFEQESYSASVSEAALP---GQYIATITARDVDSGSY 504
            ..|.:..|.||:|..:.|:::|.|||.|||:|..|...:.|.  |   ...:.|:.|.|:|.|..
Mouse  1612 TVEDEGTPTLSATTHVYVTIVDENDNAPVFQQPHYEVVLDEG--PDTINTSLITVQALDLDEGPN 1674

  Fly   505 GDSGIRYSL-SGTGAELFHVNEQTGVISLANCHDNGESNRR------------------------ 544
            |.  :.|:: :|.....|.:|:.||||:.|...|...|:.|                        
Mouse  1675 GT--VTYAIVAGNIINTFRINKHTGVITAAKELDYEISHGRYTLIVTATDQCPILSHRLTSTTTV 1737

  Fly   545 --ERRDLNEDEHVEEDDGEGHLEMLSME---------AATREIGTEPTVQYTLITQAPEEQASSV 598
              ...|:|::......|.||..::...:         |..|:.|....|:|:::...|..:....
Mouse  1738 LVNVNDINDNVPTFPRDYEGPFDVTEGQPGPRVWTFLAHDRDSGPNGQVEYSVVDGDPLGEFVIS 1802

  Fly   599 PLPA------------------------------PVPHAAPSGVPAATAND-------------- 619
            |:..                              |:......|:.....||              
Mouse  1803 PVEGVLRVRKDVELDRETIAFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNVTI 1867

  Fly   620 -DKAPQTCL-------DYESETTYFLSYKATDDNG------RGSASVVS---------------- 654
             :.:|.:..       |.:|.....|::..|..|.      ..:..:|:                
Mouse  1868 SENSPVSSFVAHVLASDADSGCNALLTFNITAGNRERAFFINATTGIVTVNRPLDRERIPEYRLT 1932

  Fly   655 -------------------LRISVTDANDSPPVCESPLYRASVDEGA------VVFDSPLIVKAR 694
                               |.:|:.|.||:.|:.....|:|.|.|.:      .|.:.|::....
Mouse  1933 VSVKDNPENPRIARKDFDLLLVSLADENDNHPLFTEGTYQAEVMENSPAGTPLTVLNGPILALDA 1997

  Fly   695 DADTMSRISYRIRGSEQVESIFDIDRETGQIIIRPNATLDVTNLNS---DQLIFAVEANDGLFTA 756
            |.|..:.::|::.|:.  ..:|.||..||.:.:|....:|....:.   :.|:.|.:......||
Mouse  1998 DEDVYAVVTYQLLGTH--SDLFVIDNSTGVVTVRSGIIIDREAFSPPFLELLLLAEDIGQLNGTA 2060

  Fly   757 HCGVNITVRDVNNHVPNFEQQSYSAVVEENSEIGTSVERVHATDLDTGKNAELRYRIQQGSFDDF 821
            |  :.||:.|.|::.|.|...:|:..:.||...|.||.:|.|||.|:|.|.||.|||:.|:.|.|
Mouse  2061 H--LFITILDDNDNWPTFSPPTYTVHLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQDRF 2123

  Fly   822 GIVETTGEVFV-SRKLDFDRRNTYQLQIQASDQGTPSLTGTATLTINVQNSNDKDPYFVPATQHA 885
            .|...||.:.| :..:|.:.:.:|:|.:.|:|:||..|:|||.:||.:.:.||..|.|:...|..
Mouse  2124 LIHPVTGVIRVGNATIDREEQESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRPEFLNPIQTV 2188

  Fly   886 EVRADAPPGQLVYTLIALDPDVANHNALEFAGTDDITAIDKEGKELPHYDQFKEYFKISRN-GKV 949
            .|...|.||.::..:.|:|.|:  :..||: ....|.|.|...:.:|  || ::.|.::.| |.|
Mouse  2189 SVLESAEPGTIIANVTAIDLDL--NPKLEY-HIISIVAKDDTDRLVP--DQ-EDAFAVNINTGSV 2247

  Fly   950 SVNKQLDRNLFAVMRINVLVTDS---------TAPNVQQGRGLLIIQIIDVNKNPPRFNAPWSVE 1005
            .|...|:|.|.|...:.:.|.|:         :.||.:     |.:.|:|||.|.|:|. |:.: 
Mouse  2248 MVKSPLNRELVATYEVTLSVIDNASDLPEHSVSVPNAK-----LTVNILDVNDNTPQFK-PFGI- 2305

  Fly  1006 QPQIKLQMVEEQPVGTVLTTLQANDEDSSIGE------FNISDNDYFAINQTS-GMIYTIARLDY 1063
             .....:::|....||.|..:.|.|.|..:..      .:::...|..:..:| |.:.....:||
Mouse  2306 -TYYTERVLEGATPGTTLIAVAAVDPDKGLNGLITYTLLDLTPPGYVQLEDSSAGKVIANRTVDY 2369

  Fly  1064 EVVKEVKFQVTVSDTGVPALTATADVVVDIINLNDNDPKFSQSDYYFNVTENSPRGTVAGKVEAH 1128
            |.|..:.|.|..||.|.|...|...|.::|:::|||:|.|.|..|...|.|:...|||..:|.|.
Mouse  2370 EEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQEAVFEDIAVGTVILRVTAT 2434

  Fly  1129 DGDVGVFGEITYTLIGENNKYFSIDAYTGNVMVANSSILDREQIKELTLSVVAQDKA--PAAVQK 1191
            |.|.|.|..|.|:|:....| |:|:..||::.|.:|  ||||:.....|:.:|:|..  .|:.::
Mouse  2435 DADSGNFALIEYSLVDGEGK-FAINPNTGDISVLSS--LDREKKDHYILTALAKDNPGDVASNRR 2496

  Fly  1192 SATATIHINILDVNDNAPVFTRDVYNSTVAENAAYQPPA--ALLQVQAIDQDEGLYGDVRYIITA 1254
            ..:..:.|.:|||||..|.|::..::::|.||    .||  :::.:.|.|||||....:.|.: .
Mouse  2497 ENSVQVVIRVLDVNDCRPQFSKPQFSTSVYEN----EPAGTSVITMLATDQDEGSNSQLTYSL-E 2556

  Fly  1255 GNEMGLFKLDAQSGIV---YPAQSLSGKHGAYELTISARDTQGSGTMESTTKAIITVLRVNRHKP 1316
            |..|..|.:|..||:|   .|.||    :..:.||:.|.| .|...:..||..::.|:.||.::|
Mouse  2557 GPGMEAFSVDMDSGLVTTQRPLQS----YERFNLTVVATD-GGEPPLWGTTMLLVEVIDVNDNRP 2616

  Fly  1317 EFVIPALSNATI-----EIP--GDIVQPDYLLLTVRAMDNDTEENGKVSYHL--QVNNRNEQQTG 1372
            .||.|  .|.||     |||  .::.:       |.|.|||...||.|.|..  ...||:.:.  
Mouse  2617 VFVRP--PNGTILHIKEEIPLRSNVYE-------VYATDNDEGLNGAVRYSFLKTTGNRDWEY-- 2670

  Fly  1373 EFKIDEVTGELRAKTQLNRKNRANYDIILVARDAGNP-PFESLRLLSVSIVDANENRPEF---PD 1433
             |.||.::|.::...:|:|:.:|.|.:||||.|.|.| |:|:::.|.|::.|.::|.|.|   |.
Mouse  2671 -FTIDPISGLIQTAQRLDREKQAVYSLILVASDLGQPVPYETMQPLQVALEDIDDNEPLFVRPPK 2734

  Fly  1434 ASNPYK-VSINENSGRDVKIGHIQAASRSKH--NRDIFYYMLLGNEDGAFYVDKLTGDIYTNKSL 1495
            .|..|: :::.|:|.|...:|::..|..:..  |..::|::..|:||..|::.. .|.:...:.|
Mouse  2735 GSPQYQLLTVPEHSPRGTLVGNVTGAVDADEGPNAIVYYFIAAGDEDKNFHLQP-DGRLLVLRDL 2798

  Fly  1496 DREETDVYTLYILASIKADLHISEEERASFSIKTLNRDNTVAKVAITVLDVNDNPPVFEKPIYYA 1560
            |||....::..:.||.............:..:.|   |.|:.:|.:.:.|:||.||.|.|..|.|
Mouse  2799 DRETEATFSFIVKASSNRSWTPPRGPSPALDLLT---DLTLQEVRVVLEDINDQPPRFTKAEYTA 2860

  Fly  1561 GVNANAKMGAAITLVNATDADQGKNAKIEFMIVASNLYKFGATKSTGSIVPSPFAI-SQDGRISA 1624
            ||..:||:|:.:..|.|.|||.|.|:.:.:.|:|  ::.|.|..:....|...|.: |.||.:..
Mouse  2861 GVATDAKVGSELIQVLALDADIGNNSLVFYGILA--IHYFRALANDSEDVGQVFTMGSVDGILRT 2923

  Fly  1625 NTIMAEYNQDRFELEIVARELEQPQSSASTKVNIWVFDGTQLVRVILSRPPEEVYQEQEEIIAEL 1689
            ..:...|:...|.::||||:|.....:|.  :.|::....|.|:::::..|:.|...:||.|..|
Mouse  2924 FDLFMAYSPGYFVVDIVARDLAGHNDTAI--IGIYILRDDQRVKIVINEIPDRVRGFEEEFIRLL 2986

  Fly  1690 RNATQHRIIVDEIRFHLDSIGRIRMDWCDLYFHAVDPQTQQIAPVDEILKDIDRNYDYLKDYYAG 1754
            .|.|...:..|:::||:|..||:.....:|..|.|:..|.:|..||.:::.||.|.:.|::.:..
Mouse  2987 SNITGAIVNTDDVQFHVDMKGRVNFAQTELLIHVVNRDTNRILDVDRVIQMIDENKEQLRNLFRN 3051

  Fly  1755 FAIENVVPAYIAIVQDEFDLAVAGLVALVIVLFVGVISFIVLCCCLKHWNLSVPVETRRKEALIK 1819
            :.:.:|.||....:.|:.......::.|.|:||:..:.|:     |.:|.... :..|:.:|::.
Mouse  3052 YNVLDVQPAISVQLPDDMSALQMAIIVLAILLFLAAMLFV-----LMNWYYRT-IHKRKLKAIVA 3110

  Fly  1820 K--------QIIEDLNTTE------NPLWIEQKLKLYEEQELTMQVFSE---PDHIS------NS 1861
            .        .|::..||.:      ||:|::   ......||..|...|   |:::|      ||
Mouse  3111 GSAGNRGFIDIMDMPNTNKYSFDGANPVWLD---PFCRNLELAAQAEHEDDLPENLSEIADLWNS 3172

  Fly  1862 EAPGH 1866
            ....|
Mouse  3173 PTRTH 3177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad87ANP_731649.2 Cadherin_repeat 33..128 CDD:206637 27/99 (27%)
Cadherin_repeat 136..240 CDD:206637 21/107 (20%)
Cadherin_repeat 248..353 CDD:206637 38/119 (32%)
Cadherin_repeat 362..468 CDD:206637 33/116 (28%)
Cadherin_repeat 476..>533 CDD:206637 17/60 (28%)
E_set <627..667 CDD:298831 11/87 (13%)
CA 692..772 CDD:214520 20/82 (24%)
Cadherin_repeat 778..873 CDD:206637 38/95 (40%)
Cadherin_repeat 882..994 CDD:206637 34/121 (28%)
Cadherin_repeat 1015..1099 CDD:206637 24/90 (27%)
Cadherin_repeat 1108..1207 CDD:206637 35/100 (35%)
Cadherin_repeat 1215..1314 CDD:206637 32/103 (31%)
Cadherin_repeat 1327..1427 CDD:206637 36/109 (33%)
Cadherin_repeat 1437..1549 CDD:206637 25/114 (22%)
Cadherin_repeat 1557..1662 CDD:206637 32/105 (30%)
Cdh23XP_017169419.1 Cadherin_repeat 51..137 CDD:206637
Cadherin_repeat 145..240 CDD:206637
Cadherin_repeat 249..353 CDD:206637
Cadherin_repeat 361..463 CDD:206637
Cadherin_repeat 472..564 CDD:206637
Cadherin_repeat 573..674 CDD:206637
Cadherin_repeat 683..781 CDD:206637
Cadherin_repeat 789..893 CDD:206637
Cadherin_repeat 901..997 CDD:206637
Cadherin_repeat 1006..1105 CDD:206637
Cadherin_repeat 1113..1210 CDD:206637
Cadherin_repeat 1225..1315 CDD:206637 27/95 (28%)
Cadherin_repeat 1324..1421 CDD:206637 21/108 (19%)
Cadherin_repeat 1433..1530 CDD:206637 39/115 (34%)
Cadherin_repeat 1540..1637 CDD:206637 33/115 (29%)
Cadherin_repeat 1645..1747 CDD:206637 23/105 (22%)
Cadherin_repeat 1759..1854 CDD:206637 10/94 (11%)
Cadherin_repeat 1862..1962 CDD:206637 11/99 (11%)
Cadherin_repeat 1970..2072 CDD:206637 26/105 (25%)
Cadherin_repeat 2080..2176 CDD:206637 38/95 (40%)
Cadherin_repeat 2187..2296 CDD:206637 33/119 (28%)
Cadherin_repeat 2308..2405 CDD:206637 24/96 (25%)
Cadherin_repeat 2413..2511 CDD:206637 34/100 (34%)
Cadherin_repeat 2520..2614 CDD:206637 32/103 (31%)
Cadherin_repeat 2627..2725 CDD:206637 34/107 (32%)
Cadherin_repeat 2742..2848 CDD:206637 23/109 (21%)
Cadherin_repeat 2857..2958 CDD:206637 32/104 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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