DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad87A and cdh-1

DIOPT Version :10

Sequence 1:NP_731649.2 Gene:Cad87A / 41441 FlyBaseID:FBgn0037963 Length:1975 Species:Drosophila melanogaster
Sequence 2:NP_497641.2 Gene:cdh-1 / 187783 WormBaseID:WBGene00019994 Length:2779 Species:Caenorhabditis elegans


Alignment Length:1868 Identity:461/1868 - (24%)
Similarity:742/1868 - (39%) Gaps:412/1868 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 PVFTQTLNNIILYENVTVGTVVFRLEAYDPEGSPVTYGAIGADH-----FSVDPVSGNITLIKPL 84
            |.|.|.|....:.|:..:||.:..:.....|.:...|..:..|.     ..||..||.|:.|..|
 Worm    20 PTFCQCLTKFTVPESAQIGTRIGWISGKREESAAPKYFVVFPDEQTSKFLKVDERSGEISTIAHL 84

  Fly    85 DREEKDTLKF-LVSIRDRVDPEGESERDNVVEVPITFIILDLNDNPPEFQNTPYEADVNEDAAVG 148
            |.|::.  || :|::  :|:..||: .|.:|||.      |.|||.|.|.:...:.:::|.|.:|
 Worm    85 DYEKRS--KFDIVAV--KVEESGET-IDILVEVD------DENDNAPSFADQVVKLEISEFAQLG 138

  Fly   149 TTIFDKITVKDRDIVGESLDLKCLPQQQSPEACRKFRLHIIKRDATILEAAVVLNDTLNYNQRMV 213
            |: |...||.|.|  |...|:......|. .....|:|...|.:.. |:|.:|:|..|:...|..
 Worm   139 TS-FALPTVTDGD--GPKFDVHRFVILQG-NVNNVFKLASRKVNEQ-LQADLVVNGQLDREFRDK 198

  Fly   214 YHFQIEATDG--PHKT-QTTFEARVKDVQDKPPVFQGSLSTV-IDEDSPINTLVLTVHARDGDTG 274
            |...|||.||  |.|. |......:.|..|..|||..|..|. :..:..|.:.::||.|.|.|.|
 Worm   199 YELLIEAQDGGKPAKIGQLRCSIEIIDANDNAPVFSRSRYTASVSANISIGSHLITVQATDADIG 263

  Fly   275 EPRKIVYDLRTNPNDYFLLDAQTGELRTAKPLDREALEDSTGII----SLVIRARELVNGVPSD- 334
            |..:|.||::                :|:.|.:.......:|:|    ||:..:...|..|.|| 
 Worm   264 ENSRISYDIK----------------KTSAPSNSNFAISQSGVITTTASLLPASTHDVIVVASDH 312

  Fly   335 -DPLTSATAKATVTI-RDVNDSPP---VFNHKEYSVSLLENTLPGTPLALDMSVSDADVGINSKF 394
             .|..|::|..|:|: .....|||   ::..:..|..|:||:..|:.:|   .||.|....::| 
 Worm   313 GSPSLSSSAVVTITVLGSTLSSPPLDIIWLVESNSAHLMENSTLGSIVA---RVSIAQQYRDTK- 373

  Fly   395 ALRLDDVSGVFDVEPKLVTGYSQVNIRVANGTLDYENPNQR--KFIVLVVAEETDTNPRLSSTAT 457
             |||...|.:...:    |..:.|.:.:..|.||.|..::.  ||::     |.|....:.....
 Worm   374 -LRLIGSSALCPQQ----TDQAHVYLLLLCGILDRETASEHHLKFLL-----EKDGQIIIEHPQL 428

  Fly   458 ITVSVLDANDNKPVFEQESYSASVSEAALPGQYIATITARDVDSGSYGDSGIRYSLSGTGAELFH 522
            :|:.  |.|||.|.:.......|::......:   |:||:|.|.|..|  .||||:..|  ||..
 Worm   429 LTIG--DINDNAPQWHSSQIHISLNRTQGGSR---TLTAKDPDLGQNG--WIRYSVLDT--ELVS 484

  Fly   523 VNEQTGVISLAN---CHDNGESNRRERRDLNEDEHVEEDDGEGHLEMLSMEAATREIGTEPTVQY 584
            ::::||.|.:.|   |:...|...|.|         .||.|            :..:.|:..|..
 Worm   485 IDKETGRIFVPNTIDCNIGSEIKFRVR---------AEDGG------------SPALSTDLQVVA 528

  Fly   585 TLI-TQAPEEQASSVPLPAPVPHAAPSGVPAATANDDKAPQTCLDYESETTYFLSYKATDDNGR- 647
            .|: |::...|.........:|...|.|             |||           .|...:|.: 
 Worm   529 DLLDTESKPPQFEKALWQVEIPEDTPIG-------------TCL-----------VKVVANNSQC 569

  Fly   648 GSASVVSLRISVTDANDSPPVCESPLYRASVDEGAVVFDSPLIVKARDADTMSRISYRIRGSEQV 712
            |:    |.||..:..|.              ||...|            ||||       |:..:
 Worm   570 GN----SKRIRYSLQNQ--------------DEHLTV------------DTMS-------GTVCI 597

  Fly   713 ESIFDIDRETGQIIIRPNATLDVTNLNSDQLIFAVEANDGLFTAHCGVNITVRDVNNHVPNFEQQ 777
            :..||.:::...     ..|:..||.||:             |:...::|.::|||::.|.|...
 Worm   598 QKTFDFEKQKSY-----QTTVIATNANSE-------------TSTSLISIRLKDVNDNWPIFYPN 644

  Fly   778 SYSAVVEENSEIGTSVERVHATDLDTGKNAELRYRIQQGSFDDFGIVETTGEVFVSRKLDFDRRN 842
            .|...|.|..:....:..|.|:|:|:|...|:.|.|...| ..|.|...|||||..:.|   .|.
 Worm   645 EYHLTVREGPKPEEPLLVVSASDMDSGTFGEVSYHILSES-SSFSINPVTGEVFAQKPL---ARG 705

  Fly   843 TYQLQIQASDQGTPSLTGTATLTINVQNSNDKDPYFVPATQHAEVRADAPPG----------QLV 897
            .:.|.:.|.|.|..|...:|.:.|.|.:.:.|.|.|..:........|..||          ::.
 Worm   706 RFHLVVSAKDGGGQSSENSANIHITVIDKDTKTPQFSRSKYEIRTTEDILPGIAIGSVGAMSKVK 770

  Fly   898 YTLIALDPDVANHNALEFAGTDDITAIDKEGKELPHYDQFKEYFKISRNGKVSVNKQLDRNLFAV 962
            |::.:.|.|   ||          .:||::                  .||:.|.:.||.::...
 Worm   771 YSIYSGDQD---HN----------FSIDED------------------TGKIYVTRYLDADVHDT 804

  Fly   963 MRINVLVTDSTAPNVQQGRGLLIIQIIDVNKNPPRFNAPWSVEQPQIKLQMVEEQPVGTVLTTLQ 1027
            :.:|:   .:|.|:.:..:..::|.|.|.|.|||:|::  |:.:..|:..:...:|...|    |
 Worm   805 VLLNI---QATLPSGESNQTQVVIFIEDHNDNPPQFSS--SLVEISIREDLKLHEPFYVV----Q 860

  Fly  1028 ANDED-SSIGEFNIS-----DNDYFAINQTSGMIYTIARLDYEVVKEVKFQVTVSDTGVPALTAT 1086
            |:|:| ...||...|     ......|:|.:|.:.|.:.||||..:..|.:|..:|.|:|..::.
 Worm   861 ASDKDKKKNGEVRYSIISSHPGSSIEIDQFTGQLSTGSLLDYEATRNYKLRVKATDLGIPPRSSN 925

  Fly  1087 ADVVVDIINLNDNDPKFSQSDYYFNVTENSPRGTVAGKVEAHDGDVGVFGEITYTLIGENNKYFS 1151
            ..:.:.::::|||.|:|.:|.|...|.||||..|:.|||.|.|.|....|:|.|. |...::||.
 Worm   926 MTLFIHVLDVNDNAPEFEKSWYTMEVLENSPPKTIVGKVVARDKDSLENGQIVYR-ITNGSEYFG 989

  Fly  1152 IDAYTGNVMVANSSILDREQIKELTLSVVAQDKAPAAVQKSATATIHINILDVNDNAPVFTRDVY 1216
            ||...|||....|  :|||.|..:.:|:||:||  ....:|:||:..|::||||||.|    ...
 Worm   990 IDEKLGNVYTKRS--IDREVISHVDISIVAEDK--GVPPRSSTASARISVLDVNDNPP----SCL 1046

  Fly  1217 NSTVAENAAYQP-PAALLQVQAIDQDEGLYGDVRYIITAGNEMGLFKLDAQSGIVYPAQSLSGKH 1280
            :.|.....|..| ..|:..:.|:|.|:||.|.|.|  .|..:..||.:.: :|.||..:.|:...
 Worm  1047 SITPIVVPAGSPLSTAIGTIVAMDPDKGLNGSVLY--RAQLQSSLFVVKS-NGDVYLRRQLNASD 1108

  Fly  1281 GAYE-LTISARDTQGSGTMESTTKAII--TVLRVNRHKPEFVIPALSNATIEIPGD--------- 1333
            ..:: |::...| ||     ...|:::  ..:|:::...:..|.......||||..         
 Worm  1109 ERHQRLSVIVSD-QG-----VPRKSVVCHVPVRISKGSADIQIQEPFQKYIEIPKSCPTGCRLTT 1167

  Fly  1334 ---------------------------------IVQPDYLLLTVRAMDNDTEENGKVSYHLQVNN 1365
                                             |.:|.|.|:.|.:..||.:::.::........
 Worm  1168 LNATGVSSWLIQSSEISNHFAIREGVLFMISHPIHRPPYSLVIVLSDKNDRQKSIQLRVLASGEA 1232

  Fly  1366 RNEQQT----------------------GEF------------KIDEVTGELRAKTQLNRKNRAN 1396
            .|:::|                      |.|            ::|:..|.|.....|.|.:..|
 Worm  1233 ANKEETIRISDSNSIGTKIGRLGEKSADGSFFYRFSSEESCPLELDQTGGLLYLADGLRRGDTHN 1297

  Fly  1397 YDIILVARDAGNPPFESLRLLSVSIVDANENRPEFPDASNPYKVSINENSGRDVKIGHIQAASRS 1461
            :.......:..:...|.:| :.:.|.....::|.|.  :...:|:|.|::.....|..:.|....
 Worm  1298 FSCFFEKFNTTDGSAEEMR-VDLEISRTKSDKPRFD--TGHLRVNIREDTPTGSIITTVNATVSD 1359

  Fly  1462 KHNRDIFYY--MLLGNEDGAFYVDKLTGDIYTNKSLDREETDVYTLYILASIKADLHISEEERAS 1524
            .....|.|.  :|:.|    |.:|:.||||....:|....|..|.|.:.|....           
 Worm  1360 DSASPISYRFPLLIDN----FSIDQFTGDITLIDTLHWHVTPTYNLIVEAFTSG----------- 1409

  Fly  1525 FSIKTLNRDNTVAKVAITVLDVNDNPP-VFEKPIYYAGVNANAKMGAAITLVNATDADQGKNAKI 1588
                    ..|...|.:.|.||||:.| :..:|...  :.::.:.|..:..|.|.|.|  |:.:|
 Worm  1410 --------PGTTLLVTVNVDDVNDHTPFIVSQPTVL--LPSSYRKGGMVHRVVAIDLD--KDPEI 1462

  Fly  1589 EFMI------VASNLYKFGATKSTGSIVPSPFAISQD----GRISANTIMAEYNQD--RFELEIV 1641
            .:.:      ||...:|.........:|.|..|:|..    |.....||.|...||  :|:.:.|
 Worm  1463 RYSLKYAGSEVAKEFFKIDEKSGEIFVVESSSALSTSFGGAGLPETLTIRATDLQDLTKFDEQKV 1527

  Fly  1642 ARELEQPQSSASTKVNIW-VFDGTQLVRVILSRPPE--EVYQ--EQEEIIAELRNATQHRIIVDE 1701
            .  |:...:|.||    | .||.......|||..|:  ::.|  .||.:..:|..::.|      
 Worm  1528 L--LKASNASRST----WHFFDEQHKDVTILSTSPQGSQILQLKFQEGVDLQLIPSSPH------ 1580

  Fly  1702 IRFHLDSIGRIRMDWCDLYFHAVDPQTQQIAPVDEILKDIDRNYDYLK 1749
              |.|.|...::..      .:|...||:...|.:  ||.:.:|..||
 Worm  1581 --FELKSSKIVQKS------ASVATGTQRFTIVAQ--KDDELDYSTLK 1618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad87ANP_731649.2 Cadherin_repeat 33..128 CDD:206637 27/100 (27%)
Cadherin_repeat 136..240 CDD:206637 31/106 (29%)
Cadherin_repeat 248..353 CDD:206637 28/112 (25%)
Cadherin_repeat 362..468 CDD:206637 27/107 (25%)
Cadherin_repeat 476..>533 CDD:206637 18/56 (32%)
CA_like <627..667 CDD:481204 8/40 (20%)
CA 692..772 CDD:214520 17/79 (22%)
Cadherin_repeat 778..873 CDD:206637 29/94 (31%)
Cadherin_repeat 882..994 CDD:206637 22/121 (18%)
Cadherin_repeat 1015..1099 CDD:206637 23/89 (26%)
Cadherin_repeat 1108..1207 CDD:206637 42/98 (43%)
Cadherin_repeat 1215..1314 CDD:206637 25/102 (25%)
Cadherin_repeat 1327..1427 CDD:206637 24/175 (14%)
Cadherin_repeat 1437..1549 CDD:206637 26/113 (23%)
Cadherin_repeat 1557..1662 CDD:206637 27/117 (23%)
cdh-1NP_497641.2 Cadherin_repeat 29..118 CDD:206637 27/99 (27%)
Cadherin_repeat 129..229 CDD:206637 31/104 (30%)
Cadherin_repeat 238..328 CDD:206637 27/105 (26%)
Cadherin_repeat 459..532 CDD:206637 28/97 (29%)
Cadherin_repeat 546..637 CDD:206637 33/169 (20%)
Cadherin_repeat 645..733 CDD:206637 29/91 (32%)
Cadherin_repeat 746..833 CDD:206637 22/120 (18%)
Cadherin_repeat 843..938 CDD:206637 24/98 (24%)
Cadherin_repeat 947..1041 CDD:206637 42/98 (43%)
Cadherin_repeat 1051..1136 CDD:206637 23/93 (25%)
Cadherin_repeat 1337..1426 CDD:206637 26/111 (23%)
Cadherin_repeat 1445..>1515 CDD:206637 18/71 (25%)
Cadherin_repeat 1638..1723 CDD:206637
Cadherin_repeat 1734..1817 CDD:206637
Cadherin_repeat 1836..1923 CDD:206637
Cadherin_repeat 1934..2025 CDD:206637
Cadherin_repeat 2034..2120 CDD:206637
Cadherin_repeat 2135..2226 CDD:206637
Cadherin_repeat 2235..2330 CDD:206637
Cadherin_repeat 2345..2437 CDD:206637
Cadherin_repeat 2446..2534 CDD:206637
Blue background indicates that the domain is not in the aligned region.

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