DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad87A and Pcdh10

DIOPT Version :10

Sequence 1:NP_731649.2 Gene:Cad87A / 41441 FlyBaseID:FBgn0037963 Length:1975 Species:Drosophila melanogaster
Sequence 2:NP_001091640.1 Gene:Pcdh10 / 18526 MGIID:1338042 Length:1057 Species:Mus musculus


Alignment Length:897 Identity:222/897 - (24%)
Similarity:355/897 - (39%) Gaps:227/897 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   691 VKARDADTM--SRISYRIRGSEQVESIFDIDRETGQIIIR------------PNATLDVTNLNSD 741
            :.||...|:  ||..|           .|::.|||.:.:.            |:..|.:.....:
Mouse    48 LSARRFQTVANSRTPY-----------LDLNLETGVLYVNEKIDREQICKQSPSCVLHLEVFLEN 101

  Fly   742 QL-IFAVEANDGLFTAHCGVNITVRDVNNHVPNFEQQSYSAVVEENSEIGTSVERVHATDLDTGK 805
            .| :|.||             |.|.|:|::.|:|.:...:..:.|::..||......|.|.|.|.
Mouse   102 PLELFRVE-------------IEVLDINDNPPSFPEPDLTVEISESATPGTRFPLESAFDPDVGT 153

  Fly   806 NAELRYRIQQGSFDDFGI-VETTG------EVFVSRKLDFDRRNTYQLQIQASDQG--------- 854
            |:...|.|...|:  |.: |:|.|      |:.:.:.||.:::..::..:.|.|.|         
Mouse   154 NSLRDYEITPNSY--FSLDVQTQGDGNRFAELVLEKPLDREQQAVHRYVLTAVDGGGGGGGGEGG 216

  Fly   855 ----------TPSLTGTATLTINVQNSNDKDPYFVPATQHAEVRADAPPGQLVYTLIALDPDVAN 909
                      ....||||.|||.|.:|||..|.|........:..::|||.||..|.|.|||...
Mouse   217 GGGGGAGLPPQQQRTGTALLTIRVLDSNDNVPAFDQPVYTVSLPENSPPGTLVIQLNATDPDEGQ 281

  Fly   910 HNALEFAGTDDITAIDKEGKELPHYDQFKEYFKIS-RNGKVSVNKQLDRNLFAVMRINVLVTDST 973
            :..:.::.:..|:            .:.:|.|.:| |.|::.|:.:||.....|.::.|...| .
Mouse   282 NGEVVYSFSSHIS------------PRARELFGLSPRTGRLEVSGELDYEESPVYQVYVQAKD-L 333

  Fly   974 APNVQQGRGLLIIQIIDVNKNPPRFNAPWSVEQPQIKLQMVEEQPVGTVLTTLQANDEDSS---- 1034
            .||.......::::::|.|.|.|      .:....:|..:.|....|||:......|.||.    
Mouse   334 GPNAVPAHCKVLVRVLDANDNAP------EISFSTVKEAVSEGAAPGTVVALFSVTDRDSEENGQ 392

  Fly  1035 -----IGE--FNI--SDNDYFAINQTSGMIYTIARLDYEVVKEVKFQVTVSDTGVPALTATADVV 1090
                 :|:  |.:  |..:|:.       |.|.|.||.|........|...|.|.|||:.:..:.
Mouse   393 VQCELLGDVPFRLKSSFKNYYT-------IVTEAPLDREAGDSYTLTVVARDRGEPALSTSKSIQ 450

  Fly  1091 VDIINLNDNDPKFSQSDYYFNVTENSPRGTVAGKVEAHDGDVGVFGEITYTLIGENNK------Y 1149
            |.:.::|||.|:|||..|...||||:..|.....|.|.|.|.|...::||:::....:      |
Mouse   451 VQVSDVNDNAPRFSQPVYDVYVTENNVPGAYIYAVSATDRDEGANAKLTYSILECQIQGMSVFTY 515

  Fly  1150 FSIDAYTGNVMVANSSILDREQIKELTLSVVAQDK-APAAVQKSATATIHINILDVNDNAPVFTR 1213
            .||::..|.:....|  .|.||||:.:..|.|:|. :|.|:  :..||::|.|:|.|||||....
Mouse   516 VSINSDNGYLYALRS--FDYEQIKDFSFQVEARDAGSPQAL--AGNATVNILIVDQNDNAPAIVA 576

  Fly  1214 DV--YNSTVAENA---AYQPPAALLQVQAIDQDEGLYGDVRYIITAGNEMGLFKLDAQSGIVYPA 1273
            .:  .|.|.|...   :.:|...|.:|.|:|.|:|....:.|.|..||||.||:||.::|.:..|
Mouse   577 PLPGRNGTPAREVLPRSAEPGYLLTRVAAVDADDGENARLTYSIVRGNEMNLFRLDWRTGELRTA 641

  Fly  1274 QSLSGKHG---AYELTISARDTQGSGTMESTTKAIITVLRVNRHKP------------EFVIPAL 1323
            :.:..|..   .|||.|..|| .|...:.||...::.::. ...:|            |.:.|:.
Mouse   642 RRVPAKRDPQRPYELVIEVRD-HGQPPLSSTATLVVQLVD-GAVEPQGGGGDRGGGSGEHLRPSR 704

  Fly  1324 SNATIEIPGDIVQPDYLLLTVRAMDNDTEENGKVSY-------HLQVNNRNEQQTGEFKIDEVT- 1380
            |.      |.....|..|:.:.|:       |.||:       .|.|..:.|:     |::..| 
Mouse   705 SG------GGETSLDLTLILIIAL-------GSVSFIFLLAMIVLAVRCQKEK-----KLNIYTC 751

  Fly  1381 ---------------------GELRAKTQLNRKNRANYDIILVARDAGNPPFESLRLLSVSIVDA 1424
                                 .:.||:    :|..:..||:||  .:.|.|              
Mouse   752 LASDCCLCCCCCGNGSSTCCGRQARAR----KKKLSKSDIMLV--QSANVP-------------- 796

  Fly  1425 NENRPEFPDASNPYKVSINENSGRDVKIGHIQAASRSKHNRDIFYYMLLGNE 1476
                      |||.:|.:.|:.|          .....||::..|.:.|..|
Mouse   797 ----------SNPAQVPVEESGG----------FGSHHHNQNYCYQVCLTPE 828

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad87ANP_731649.2 Cadherin_repeat 33..128 CDD:206637
Cadherin_repeat 136..240 CDD:206637
Cadherin_repeat 248..353 CDD:206637
Cadherin_repeat 362..468 CDD:206637
Cadherin_repeat 476..>533 CDD:206637
CA_like <627..667 CDD:481204
CA 692..772 CDD:214520 20/94 (21%)
Cadherin_repeat 778..873 CDD:206637 30/120 (25%)
Cadherin_repeat 882..994 CDD:206637 26/112 (23%)
Cadherin_repeat 1015..1099 CDD:206637 25/96 (26%)
Cadherin_repeat 1108..1207 CDD:206637 34/105 (32%)
Cadherin_repeat 1215..1314 CDD:206637 32/106 (30%)
Cadherin_repeat 1327..1427 CDD:206637 21/128 (16%)
Cadherin_repeat 1437..1549 CDD:206637 9/40 (23%)
Cadherin_repeat 1557..1662 CDD:206637
Pcdh10NP_001091640.1 Cadherin_2 19..101 CDD:462413 12/63 (19%)
Cadherin_repeat 128..246 CDD:206637 31/119 (26%)
Cadherin_repeat 254..354 CDD:206637 26/112 (23%)
Cadherin_repeat 367..459 CDD:206637 25/98 (26%)
Cadherin_repeat 467..570 CDD:206637 34/106 (32%)
Cadherin_repeat 590..680 CDD:206637 29/90 (32%)
Cadherin_C_2 713..838 CDD:465139 31/168 (18%)
Blue background indicates that the domain is not in the aligned region.

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