DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad87A and cdh-3

DIOPT Version :9

Sequence 1:NP_731649.2 Gene:Cad87A / 41441 FlyBaseID:FBgn0037963 Length:1975 Species:Drosophila melanogaster
Sequence 2:NP_498687.2 Gene:cdh-3 / 176085 WormBaseID:WBGene00000395 Length:3361 Species:Caenorhabditis elegans


Alignment Length:2049 Identity:438/2049 - (21%)
Similarity:761/2049 - (37%) Gaps:621/2049 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 ADHFSVDPVSGNITLIKPLDREEKDTLKFLVSIRDRVDPEGES--ERD---NVVEVPITFIILDL 125
            :|.|.:||.:|.|.....|   .:....:.:.||..:.|....  |.|   .|::..:...::..
 Worm   479 SDVFKIDPFNGIIVTSSIL---PEGVTSYHLPIRIHLPPPSTQLVEADVFVKVIQESVPKNLIRS 540

  Fly   126 NDNPPEFQNTPYEADVNEDAAVGTTI--FDKITVKDR-DIVGESLDLKCLPQQQSPEACRKFRLH 187
            :::|...:.. |.....:|.::||.|  ..|..:... |.|.|   |...|              
 Worm   541 SESPIHLKRA-YTFTTWQDVSLGTVIGRLPKAQIYSTIDTVSE---LGVFP-------------- 587

  Fly   188 IIKRDATILEAAVVLNDTLNYNQRMVYHFQIEATDGPHKTQTT-FEARVKDVQDKPPVFQGSLST 251
                |.::.....:.:|.:.....:|         ..:.|||: ....||.:....|:.|.:...
 Worm   588 ----DGSVFVGKTITSDFVTLPVTLV---------NRNTTQTSIITLIVKPLNQHSPICQITEIH 639

  Fly   252 VIDEDSPINTLVLTVHARDGDTGEPRKIVYDLRTNPNDY---FLLDAQTGELRTAKPLDREALED 313
            |: |::||.|:...:.|||.|:|....:.|.:.|..:||   |.||:.:|.||:.|..|.|....
 Worm   640 VL-ENAPIGTIFGRIQARDEDSGLSGVVSYKILTKSDDYDGIFHLDSTSGSLRSLKAFDAEKKRS 703

  Fly   314 STGIISLVIRARELVNGVPSDDPLTSATAKATVTIRDVNDSPPVFNHKEYSVSLLENTLPGTPLA 378
            .|    ....|::|  |.||    .:....||:.|.||||:.|.|..:.|:.::...:  ...:|
 Worm   704 YT----FEYEAKDL--GTPS----KTTNCPATIFIEDVNDNVPKFGSRYYTATISGKS--NETVA 756

  Fly   379 LDMSVSDADVGI-NSKFALRLDDVSGVFDVEPKLVTG-----------YSQVNIRVANGTLDYEN 431
            : :..:|.||.: |.|....|.:....|.::.:  ||           :.::||.::...:|.|.
 Worm   757 I-VQANDNDVDVKNQKLQYHLLNYHDFFQLDKE--TGKVTTIQDVPMTWQRLNISISAVNMDSER 818

  Fly   432 PNQRKFIVLVVAEETDTNPRLSSTATITVSVLDANDNKPVFEQESYSASVSE---AALPGQYIAT 493
            ..|.|..:||.         ::|::.:.|. |::.:...:|:.:.....|..   |:....|.:|
 Worm   819 FLQSKTFLLVT---------VTSSSKLAVQ-LNSGNLIRIFKNDKIGEKVGHLDIASSETVYWST 873

  Fly   494 ITAR-DVDS-------------GSYGDSGIRYSLSGTGAELFH---------------------V 523
            :..| .|||             .|.|...|..|.:|...|..:                     :
 Worm   874 LDPRLHVDSSGNIILIRRNAKQASTGFDIILTSENGEKTEKVNFEVEFVDSERSEDVEKVMDIVL 938

  Fly   524 NEQTGVIS-LANCHDNGESNRRERRDLNED-------EH-----------------VEEDDGEGH 563
            ||.|..:| |.|...|.:.:|....:.|..       ||                 :|.:|.||.
 Worm   939 NENTTEVSNLMNDWKNWKISRVILENANNSGNNTFFLEHKKLWRTKNATVSNAYIILESEDQEGS 1003

  Fly   564 LEMLSMEAATREIGTEPTVQYTLITQA----PEEQASSVPLPAPVP-------------HAAPSG 611
            .:...:...|  ....|:.:.:.|:.|    |   .|:||||:...             |.....
 Worm  1004 PKSFKLLHVT--TSPSPSSESSCISPAHLISP---PSTVPLPSNCSNVKLQNLKTSLQIHENNLL 1063

  Fly   612 VP-----------AATANDDKAP--QTCL-DYESETTYFLSYKATDDNGRGSASVVSLRISVTDA 662
            :|           .:|.|.|..|  .|.: ||.||...|           .:.:|:.|..|:...
 Worm  1064 IPTQSELINHVDLVSTQNSDMKPFMMTLIKDYLSEDVRF-----------STNNVLMLLSSIHPI 1117

  Fly   663 NDSPPVCESPLYRASVDEGAVVFDSPLIVKARDADTMSRISYRIRGSEQVESIFDIDRETGQIII 727
            ..|       ..|.:.:.|                  .||.|.|.|::::    .||.:||::|:
 Worm  1118 GTS-------FGRVTAESG------------------YRIRYYIVGTDKI----SIDADTGELIL 1153

  Fly   728 RPNATLDVTNLNSDQLIFAV-------------EANDGLFTAHCG-------------------- 759
            :...   ..||| |.||.||             ...|.|......                    
 Worm  1154 KERF---YRNLN-DILIVAVIPKGIAKAKITIEVIEDRLILPQSNFFIPSPPSFNSKSKIGKIPI 1214

  Fly   760 ----VNITVRDVNNHVPNFE--------------------------------------------- 775
                |.|.|.|.:.:|.|||                                             
 Worm  1215 DRDDVTIDVIDEHFYVRNFEIFVKRHFIPNSNFYDLKGTVKKGKLSAPISVTLFFGEKMKSREIR 1279

  Fly   776 QQSYSAVVEENSEIGTSVERVHATDLDTGKNAELRYRIQQGS----FDDFGIVETTGEVFVSRKL 836
            :......:||||.|||.|..|..:|       ..:||:...:    .|..||:.||        .
 Worm  1280 ENELMFEIEENSPIGTVVGVVPNSD-------TTKYRLVDPTCGLLIDQEGIIRTT--------T 1329

  Fly   837 DFDRRNTYQLQIQASDQGTPSLTGTATLTINVQNSNDKDPYFVPATQHAEVRADAPPGQLV---- 897
            .|||.||..|:.:..:   ||......|.|.:.:.||..|..:.|           ||:::    
 Worm  1330 VFDRENTSLLKTKMIE---PSENRIWNLLIFIADVNDNKPKILNA-----------PGRIIVYDD 1380

  Fly   898 --YTL-------IA-------LDPDVANHNALEFAGTDDITAIDKE--GKELPHYDQ---FKEYF 941
              |.|       ||       :|.||..:..:|.:|...:.:|..|  ...:..||.   ||.:|
 Worm  1381 LNYKLEWEDLDAIASDVSFSIVDGDVFGNLEIEDSGVISLNSIPNESFNATIRIYDNRPPFKVHF 1445

  Fly   942 KISRNGKVSVNKQLDRNLFAV------------------MRINVLVTDSTAPNVQQGRGLLIIQI 988
                 ..|::..|:.:.|.||                  :..:.:||....|.:... ...|..|
 Worm  1446 -----DDVTIEFQVTQKLRAVTCEDAEFWMFFGNEDVGMLIASEIVTWRIVPQIGSD-SFKIDPI 1504

  Fly   989 IDVNKNPPRFNAPWSVEQPQIKLQMV--EEQPVG----------------TVLT--TLQAN---- 1029
            ..:.::.|  |...:.:..::|:|.:  :.:.||                .||:  |.:.|    
 Worm  1505 TGIIQSTP--NTKPTSDIAKLKIQAISYDGERVGFCDVKIHIDKAAFVENVVLSNGTFEFNISET 1567

  Fly  1030 -DEDSSIGE------------FNISDNDY-FAINQTSGMIYTIARLDYEVVKEVKFQVTVSDTGV 1080
             |..:.:|:            |.|.|||| |.|:...|.|:|.:.||:|.:|..:|.:|      
 Worm  1568 ADRFTEVGKIVILGAGLEGSVFRIQDNDYNFTISPFDGTIFTNSPLDFENIKTYRFNIT------ 1626

  Fly  1081 PALTATADVVVDIINLNDNDPKFSQSDYYFNVTENSPRGTVA-----GKVEAHDGDVGVFGEITY 1140
             |..:|:.|::.:.:.||..|:|...| ..|:.......||:     |...|.|.|.|..|.:||
 Worm  1627 -AGKSTSQVIIHVTDENDEAPRFITGD-VVNLKVLEELDTVSYPLIIGSSIAEDLDEGQNGLVTY 1689

  Fly  1141 TLIGENNKYFSIDAYTGNVMVANSSI-LDREQIKELTLSVVAQDKAPAAVQKSATATIHINILDV 1204
            :::..|...|::::.||:::   |.| ||||:.....|.:.|:|....::  |||:.|.|::.|:
 Worm  1690 SILSGNTSLFAVNSTTGDIL---SLIPLDREESSLHELLIEAKDAGIPSL--SATSKILIHVGDI 1749

  Fly  1205 NDNAPVFTRDVYNSTVAENAAYQPPAALLQVQAIDQDEGLYGDVRYIITAGNEMGL-FKLDAQSG 1268
            |||.|.|....|...::||:  :..:.::::.|.|:|:.  .:::|.:.:.:|:.: |:::..:|
 Worm  1750 NDNTPEFELSSYFIKISENS--KIGSKIIRILATDKDKD--AELQYSLESNDEITIPFRINVATG 1810

  Fly  1269 IVYPAQSLSGKHGAYELTISARDTQGSGTMESTTKAIITVLRVNRHKPEF--VIPALS--NATIE 1329
            .:..|..::.:... |.....:.|.|    |.::|.|:.:     |..:|  ..|.::  |:.|.
 Worm  1811 WITVAGKVNREENE-EFRFFVKVTDG----EKSSKVIVEI-----HVEDFNDNHPMINDRNSDIF 1865

  Fly  1330 IPG--------------DIVQPDYLLLTVRAMDNDTEENGKVS---------------------- 1358
            :|.              |:.:.|:|..::...:.:..|||:::                      
 Worm  1866 VPDPTRSVEIIHVINVHDLDKSDHLKFSLNNSNLNLSENGEITLKSPLQTAVPVRVTVSDDAGHV 1930

  Fly  1359 ------YH----------------LQVNNRNEQQTGEFK-------------------IDEVTGE 1382
                  :|                :.|...:||:...||                   :::.||.
 Worm  1931 AFMEYLFHPHSRKHFPVFVEKLDTVSVREHDEQELAVFKANGDSIRYSIVSRCSDHLEMEKSTGI 1995

  Fly  1383 LRAKTQLNRKNRANYDIILVARD-AGNPPFESLRLLSVSIVDANENRPEFPDASNPYKVSINENS 1446
            |:.|:.|:.:..:...:.::|.. ..|.|..::...::.|||.|:|.|.|.  ...|:.::.|||
 Worm  1996 LKTKSSLDAEEYSECLVFIIATTYFDNKPLSTITKATIKIVDINDNSPRFD--QQLYRFNVTENS 2058

  Fly  1447 GRDVKIGHIQAASRSKHNRDIFYYMLLGNEDGAFYVDKLTGDIYTNKSLDREETDVYTLYILASI 1511
            |..: |||:.|....:.:| :||.::.|:.:..|.|.: :|.|.:.:.||||            .
 Worm  2059 GPKL-IGHVIARDIDRSSR-VFYEIVGGDANHEFMVTE-SGQIESVRDLDRE------------T 2108

  Fly  1512 KADLHISEEERASFSIKTLNRDNTVAKVAITVLDVNDNPPVFEKPIYYAGVNANAKMGAAITLVN 1576
            |::.|:..|  |....|...|.||.  |.:||||.:||.|.|.: |::..|..:.::|..:..::
 Worm  2109 KSEYHLIVE--AIDDGKPRRRGNTT--VIVTVLDEDDNAPRFSR-IFHVEVPEDVRIGEPVIQLS 2168

  Fly  1577 ATDADQGKNAKIEFMIVASNLYKFGATKSTGSIVPSPFAISQDGRISANTIMAEYNQDRFELEIV 1641
            |:|||:..|.:.|.               .|.....||      |:..||.|...| |..:.|  
 Worm  2169 ASDADEHSNHRFEL---------------DGGGEGIPF------RVDENTGMVFVN-DSLDFE-- 2209

  Fly  1642 ARELEQPQSSASTKVNIWVFDGTQLVRVILSRPPEEV------YQEQEEIIAELRNATQHRIIVD 1700
                    ...|.::.:.:.||..|:...|....::|      :::.|.:.....|:.       
 Worm  2210 --------KKQSYRIKVKLTDGAWLIETSLFVNVKDVNDNAPIFEKPEYLFISEENSA------- 2259

  Fly  1701 EI-RFHLDSI-----GRIRMDWCDLYFHAVDPQT 1728
            || :||...:     |:||......|| .::|.|
 Worm  2260 EIGQFHASDMDSENNGKIRYSVTSPYF-KIEPST 2292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad87ANP_731649.2 Cadherin_repeat 33..128 CDD:206637 13/66 (20%)
Cadherin_repeat 136..240 CDD:206637 19/107 (18%)
Cadherin_repeat 248..353 CDD:206637 34/107 (32%)
Cadherin_repeat 362..468 CDD:206637 22/117 (19%)
Cadherin_repeat 476..>533 CDD:206637 18/95 (19%)
E_set <627..667 CDD:298831 9/40 (23%)
CA 692..772 CDD:214520 24/116 (21%)
Cadherin_repeat 778..873 CDD:206637 27/98 (28%)
Cadherin_repeat 882..994 CDD:206637 28/154 (18%)
Cadherin_repeat 1015..1099 CDD:206637 29/119 (24%)
Cadherin_repeat 1108..1207 CDD:206637 31/104 (30%)
Cadherin_repeat 1215..1314 CDD:206637 17/99 (17%)
Cadherin_repeat 1327..1427 CDD:206637 26/177 (15%)
Cadherin_repeat 1437..1549 CDD:206637 34/111 (31%)
Cadherin_repeat 1557..1662 CDD:206637 20/104 (19%)
cdh-3NP_498687.2 Cadherin_repeat 31..113 CDD:206637
Cadherin_repeat 121..225 CDD:206637
Cadherin_repeat 242..326 CDD:206637
Cadherin_repeat 448..529 CDD:206637 12/52 (23%)
Cadherin_repeat 637..734 CDD:206637 35/107 (33%)
Cadherin_repeat 743..831 CDD:206637 19/101 (19%)
Cadherin_repeat 1116..1184 CDD:206637 21/100 (21%)
Cadherin_repeat 1285..1364 CDD:206637 28/96 (29%)
Cadherin_repeat 1559..1643 CDD:206637 24/90 (27%)
Cadherin_repeat 1671..1752 CDD:206637 28/85 (33%)
Cadherin_repeat 1760..1853 CDD:206637 19/106 (18%)
CA 1975..2043 CDD:214520 13/67 (19%)
Cadherin_repeat 2050..2142 CDD:206637 34/110 (31%)
Cadherin_repeat 2149..2241 CDD:206637 25/123 (20%)
Cadherin_repeat 2250..2329 CDD:206637 12/51 (24%)
LamG 3082..3201 CDD:214598
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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