DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad87A and cdh-4

DIOPT Version :9

Sequence 1:NP_731649.2 Gene:Cad87A / 41441 FlyBaseID:FBgn0037963 Length:1975 Species:Drosophila melanogaster
Sequence 2:NP_001317871.1 Gene:cdh-4 / 175590 WormBaseID:WBGene00000396 Length:4328 Species:Caenorhabditis elegans


Alignment Length:1825 Identity:437/1825 - (23%)
Similarity:730/1825 - (40%) Gaps:437/1825 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 FTQTLNNIILYENVTVGTVVFRLEAYDPEGSPV-TYGAIG--ADHFS---------VDPVSGNIT 79
            ||:...:..|.||.|:           |.||.: :...||  .||||         :.|.:|.|:
 Worm  1883 FTRNEYHTSLIENTTL-----------PPGSIILSVATIGDKLDHFSIVNPHEAFFIHPGTGVIS 1936

  Fly    80 LIK-PLDREEKDTLKFLVSIRDRVDPEGESERDNVVEVPITFI-ILDLNDNPPEFQNTPYEADVN 142
            ... .||||:...::.:|..:..       |::.|:...:..: |.::||..|.|..|||     
 Worm  1937 SSGIALDREKSAIIRLVVQAKSH-------EKNPVMARALVVVGIENINDETPIFMGTPY----- 1989

  Fly   143 EDAAVGTTIFDKITVKDRDIVGESLDLKCLPQQQSPEACRKFRLHIIKRDATILEAAVVLNDTLN 207
             |..:|.:....:.::.:.|..:..|:..:..:..||..:            |:...|||...|.
 Worm  1990 -DITIGHSDIGTVVLEPKVIDNDEGDVVTISSENMPEYFK------------IVGGKVVLGKKLP 2041

  Fly   208 --YNQRMVYHFQIEATD--GPHKTQTTFEARVKDVQDKPPVFQGSLSTVI--DEDSPINTLVLTV 266
              ..:.:.::|::.|.|  ..|:.:...:.||  |....|||..::.|.:  .|.:..:|:::.|
 Worm  2042 SIEEEDLEFNFKLIAKDNGSVHRVEEPVKIRV--VDKARPVFSQNVYTAVISKESTKKSTVLVKV 2104

  Fly   267 HARDGDTGEPRKIVYDLRTNPNDYFLLDAQTGELRTAKPLDREALEDSTGIISLVIRARELVNGV 331
            .|:.....:.:.::.....:....|.:|..|||:|    |:...:...|. .:..:.|||:..  
 Worm  2105 MAKSSLQSKSKGLIGYRILDKKSPFSVDFLTGEVR----LNNLKMLAETN-YTFEVEAREVTR-- 2162

  Fly   332 PSDDPLTSATAKATVTIRD-VNDSPPVFNHKEYSVSLLENTLPGTPLALDMSVSDADVGINSKFA 395
                |...|.|:..:.::. :....|||...:|:.|..|:|..|..| |.:..:.:|.....:::
 Worm  2163 ----PKMIAKAQVEIIVKSGITTHAPVFEKLKYTASTPESTSIGQRL-LTIKATTSDENDTIEYS 2222

  Fly   396 LRLDDVSGVFDVEPKLVTGYSQVNIRVANGTLDYENPNQRKFIVLVVAEETDTNPRLSSTATITV 460
            |     ||..|:|....||  .|.|   .|.||||  ..:|:.:.:||  |.:..::||.|...|
 Worm  2223 L-----SGSKDIEIHPETG--DVTI---TGQLDYE--KTQKYDLKLVA--TSSGKQVSSEAEFIV 2273

  Fly   461 SVLDANDNKPVFEQESYSASVSEAALPGQYIATITARDVDSGSYGD---SGIRYSLSGTGAELFH 522
            .:.|.||..|.|.:...||.:|::|:.||:|..::|.|:|:.:..|   ..:.|.:......||:
 Worm  2274 LIEDVNDEMPEFIRSDVSAKISDSAITGQFITIMSATDMDTTNSLDEESQKLLYKIVDGDETLFN 2338

  Fly   523 VNEQTGVISLANCHDNGESNRRERRDLNEDEHVEED----------DG------EGHLEML---S 568
            ::..||.:|||             |.:.:|:.|.||          ||      :..:|:|   |
 Worm  2339 ISPATGELSLA-------------RPVEQDDLVNEDTKKVLNVSVTDGMFTAYAKLVVEILRSGS 2390

  Fly   569 MEAATR-------EIGTEPTV--QYTLITQA-----PEEQASSVPLPAPVPHAAPSGVPAATAND 619
            |:...|       ....|.|:  :..|:|.|     |..|.|..|..:.....:....|.|.  |
 Worm  2391 MQPPPRFEQSHYVANALENTIVNKSALLTVAVKGGVPPLQFSLAPTTSSNSSTSKEAWPVAI--D 2453

  Fly   620 DKAPQ----TCLDYESETTYFLSYKATDDNGRGSASVVSLRISVTDANDSPPVCESPLYRASVDE 680
            .|..:    ..|:|..:..|.:.....|..||.:.|  :|.:||.|.||.||....|.|..|:.|
 Worm  2454 RKTGRIHVSRVLNYHRDKRYQIPLVVEDATGRRAFS--TLTLSVIDINDKPPFFVLPFYSTSISE 2516

  Fly   681 GAVVFDSPLIVKARDADTMSRISYR-IRGSEQVESIFDIDRETGQIII------RPNATLDVTNL 738
            .|...|:.::|.|.|.|....|.|. :.|||  ...|.:....|.|.:      :...||.:|  
 Worm  2517 SAKEGDTVMMVSATDDDENDTIEYSLLDGSE--SQFFSVHPRQGTITVAKKLEHKAGVTLSLT-- 2577

  Fly   739 NSDQLIFAVEANDGLFTAH-----CGVNITVRDVNNHVPNFEQQSYSAVVEENSEIGTSVERVH- 797
                    ::|.|.....|     ..|||....|.  ||.|....|...|.|::::|..:.||. 
 Worm  2578 --------IKATDSANPPHHATTTVEVNIASESVK--VPRFSNSHYLFSVMEDADVGNVIGRVQQ 2632

  Fly   798 -ATDLDTGKNAELRYRIQQG-----SFDDFGIVETTGEVFVSRKLDFDRRNTYQLQIQASDQGTP 856
             .|::|     |:|:.|..|     ||..|.:..:||::.|...||.:|:|.:::.|:|...|  
 Worm  2633 METEID-----EIRFTIVPGSEESDSFLPFSVERSTGKIIVKSSLDRERKNQWKMTIRADAAG-- 2690

  Fly   857 SLTGTATLTINVQNSNDKDPYFVPATQHAEVRADAPPGQLVYTLIALDPDVANHNALEFAGTDDI 921
            .:....|:|:::.:.||..|.|....:...:..||..|..|....|:|.|.:....:.|:..:: 
 Worm  2691 GVHAITTVTVDIGDVNDNAPAFHGDYERFTISEDAAVGTSVTIFSAMDRDDSPSGRIRFSLVEE- 2754

  Fly   922 TAIDKEGKELPHYDQFKEYFKISRN-GKVSVNKQLDRNLFAVMRINVLVTDSTAPNVQQGRGLLI 985
                            ..||.::.| |.::|..||||......::....||....|....   ..
 Worm  2755 ----------------NPYFDLNENSGWLTVASQLDREKIDHYKLIARATDEGGFNTDLP---FT 2800

  Fly   986 IQIIDVNKNPPRFN--------------------------APWSVEQ------------------ 1006
            |.:.|||.:||:|.                          :|.:|.|                  
 Worm  2801 IVVSDVNDSPPQFEKEEFNIDLHLPSTSPILHFSIKDDDLSPNNVSQFFIPKGNEEGVFWIDSNN 2865

  Fly  1007 ------PQI---KLQ----------------------------------------MVEEQPVGTV 1022
                  |:|   |:|                                        :.|....|||
 Worm  2866 DLLLKRPEIVENKMQYQLKVTAFDGVFETSTKVKINLKSSKDSDIRCPEANKTVILAENSKKGTV 2930

  Fly  1023 LTTLQANDEDSSIG---EFNISDND--YFAINQTSGMIYT--IARLDYEVVKEVKF-QVTVSDTG 1079
            :.     .|.|.:|   .|.:||||  .|.:|..:|::..  ..::|||..::::| ::|:.|  
 Worm  2931 VL-----GESSLLGPNVTFKLSDNDGNVFVVNFRNGIVKVKESDQIDYEKNQQLEFHRLTIQD-- 2988

  Fly  1080 VPALTATADVVVDII-----NLNDNDPKFSQSDYYFNVTENSPRGTVA----GKVEAHDGDVGVF 1135
                  .::|..::|     |||||.||..:.....::.||.|....|    .::.|.|.|   |
 Worm  2989 ------NSEVCKELITVVIENLNDNRPKIIEKLLKVSIDENLPTSEDARQYITRIVAEDAD---F 3044

  Fly  1136 GEITYTLIGENNKYFSIDAYTGNVMVANSSILDREQIKELTLSVVAQDKAPAAVQKSATATIHIN 1200
            .||.:.::.:....|.||...|.|.|...  ||.|.:....|:|||.|.     :....|||.:.
 Worm  3045 DEIKFRMVDDFGGLFQIDDINGVVTVVKP--LDSEILGFFNLTVVASDG-----EFEDKATILVT 3102

  Fly  1201 ILDVNDNAPVFTRDVYNSTVAENAAYQPPAALLQVQAIDQDEGLYGDVRYIITAGNEMGLFKLDA 1265
            ::|.|||||.|.:..|:..|.|:.:.....|..:....||:|    .:.|.:...:......|:|
 Worm  3103 VIDQNDNAPTFEKSTYSMKVMESESIGYELAHFRASGGDQNE----TIEYYLKPSDVTSFVNLNA 3163

  Fly  1266 QSGIVYPAQSLSGKH-GAYELTISARDTQGSGTMESTTKAIITVLRVNRHKPEF-----VIPALS 1324
            |:||:..|:.|..:. .|.:||:.|:|: |...:|:..:..|:|:..|.:.|:|     |.....
 Worm  3164 QTGILTLAKPLDFETLSALKLTVVAKDS-GVPPLETEAQVEISVMDENDNAPKFEKEKYVGKVKE 3227

  Fly  1325 NATIEIPGDIVQPDYLLLTVRAMDNDTEENGKVSYHLQVNNRNEQQTG--EFKIDEVTGELRAKT 1387
            |:.   .|:.|      |||:|:|.|:|..|.|||.|::.:.....|.  .|.|:. .|::....
 Worm  3228 NSK---SGEKV------LTVKALDVDSEHFGAVSYELEIVSETTTDTPVLPFAINS-NGDVLISQ 3282

  Fly  1388 QLNRKNRANYDIILVARDAGNPPFESLRLLSVSIVDANENRPEFPDASNPYKVSINENSGRDVKI 1452
            .::.:....|::.::|:|.|.||..|..||.:.:.|.|::.|.|.|.:....|...|      .|
 Worm  3283 SIDYEKIKKYNLKVIAKDGGRPPLRSEALLEIHVEDENDHAPTFDDCNMTALVQEGE------AI 3341

  Fly  1453 GHIQAASRSKHNRDIFYYMLLGNEDGAFYVDKLTGD------------IYTNKSLDREETDVYTL 1505
            || :....|..:.|       |.::||.:..::.||            :.|.|.|:..:.|.|.|
 Worm  3342 GH-RLLKFSVSDLD-------GPKNGAPFTVEIQGDGAKSFKVNEKLELLTAKKLEYRKKDKYLL 3398

  Fly  1506 YILA-SIKA-------DLHISEEERASFSIKTLNRDNTVAKVAITVLDVNDNPPVFEKPIYYAGV 1562
            .::| .:|.       .:.|.:..|.:.::|.:       |:.|..|. |:.|         .|:
 Worm  3399 TVIAKDVKGKTTDCPLTIFIRQTSRHAPTMKPM-------KIQINTLQ-NELP---------EGI 3446

  Fly  1563 NANAKMGAAITLVNATDADQGKNAKIEFMIVASNLYKFGATKSTGSIVPSPFAISQDG------R 1621
                     |..:.|:|.|:...         :.|.:||..:  ||| .||.|..|:.      |
 Worm  3447 ---------IGRLKASDEDEEDQ---------NGLLRFGLVE--GSI-QSPRAQVQESRSTHLFR 3490

  Fly  1622 ISANT 1626
            :..||
 Worm  3491 VDPNT 3495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad87ANP_731649.2 Cadherin_repeat 33..128 CDD:206637 25/108 (23%)
Cadherin_repeat 136..240 CDD:206637 20/107 (19%)
Cadherin_repeat 248..353 CDD:206637 19/107 (18%)
Cadherin_repeat 362..468 CDD:206637 32/105 (30%)
Cadherin_repeat 476..>533 CDD:206637 17/59 (29%)
E_set <627..667 CDD:298831 13/39 (33%)
CA 692..772 CDD:214520 21/91 (23%)
Cadherin_repeat 778..873 CDD:206637 27/101 (27%)
Cadherin_repeat 882..994 CDD:206637 24/112 (21%)
Cadherin_repeat 1015..1099 CDD:206637 26/96 (27%)
Cadherin_repeat 1108..1207 CDD:206637 29/102 (28%)
Cadherin_repeat 1215..1314 CDD:206637 25/99 (25%)
Cadherin_repeat 1327..1427 CDD:206637 29/101 (29%)
Cadherin_repeat 1437..1549 CDD:206637 27/131 (21%)
Cadherin_repeat 1557..1662 CDD:206637 18/76 (24%)
cdh-4NP_001317871.1 Cadherin_repeat 160..254 CDD:206637
CA 416..490 CDD:214520
Cadherin_repeat 506..570 CDD:206637
Cadherin_repeat 615..716 CDD:206637
Cadherin_repeat 724..822 CDD:206637
Cadherin_repeat 832..925 CDD:206637
Cadherin_repeat 940..1042 CDD:206637
Cadherin_repeat 1051..1152 CDD:206637
Cadherin_repeat 1175..1235 CDD:206637
Cadherin_repeat 1269..1353 CDD:206637
Cadherin_repeat 1367..1463 CDD:206637
Cadherin_repeat 1473..1562 CDD:206637
Cadherin_repeat 1674..1779 CDD:206637
Cadherin_repeat 1887..1979 CDD:206637 24/109 (22%)
Cadherin_repeat 1988..2075 CDD:206637 19/106 (18%)
Cadherin_repeat 2085..2176 CDD:206637 19/101 (19%)
Cadherin_repeat 2191..2280 CDD:206637 31/103 (30%)
Cadherin_repeat 2291..2386 CDD:206637 27/107 (25%)
CA <2449..2503 CDD:214520 17/57 (30%)
Cadherin_repeat 2510..2598 CDD:206637 24/99 (24%)
Cadherin_repeat 2612..2708 CDD:206637 28/102 (27%)
Cadherin_repeat 2718..2808 CDD:206637 23/109 (21%)
Cadherin_repeat 2817..2903 CDD:206637 7/85 (8%)
Cadherin 2941..3009 CDD:421759 21/75 (28%)
Cadherin_repeat 3018..3109 CDD:206637 29/100 (29%)
Cadherin_repeat 3117..3212 CDD:206637 25/99 (25%)
Cadherin_repeat 3221..3322 CDD:206637 31/110 (28%)
Cadherin_repeat 3332..3418 CDD:206637 20/99 (20%)
Cadherin_repeat 3440..3536 CDD:206637 20/86 (23%)
EGF 3710..3749 CDD:238010
LamG 3781..3907 CDD:214598
EGF 3933..3963 CDD:394967
EGF_CA 3968..4004 CDD:238011
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 58 1.000 Domainoid score I7154
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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