DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cad87A and fat4

DIOPT Version :10

Sequence 1:NP_731649.2 Gene:Cad87A / 41441 FlyBaseID:FBgn0037963 Length:1975 Species:Drosophila melanogaster
Sequence 2:XP_004911174.2 Gene:fat4 / 100145590 XenbaseID:XB-GENE-981052 Length:4962 Species:Xenopus tropicalis


Alignment Length:2064 Identity:525/2064 - (25%)
Similarity:830/2064 - (40%) Gaps:484/2064 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LTLAKGETN-LPPVFTQTLNNIILYENVTVGTVVFRLEAYDPE---GSPVTY----GAIGADHFS 70
            ||::..:.| .||||.|....:.|.|:..|.:..|::.|.|.:   ...:||    |.:| :.|.
 Frog   969 LTISVHDVNDNPPVFDQLSYEVTLLESEPVNSRFFKVYATDKDSGLNGEITYSIIHGNVG-EAFG 1032

  Fly    71 VDPVSGNITLIKPLDREEKDTLKFLVSIRDR-VDPEGESERDNVVEVPITFIILDLNDNPPEFQN 134
            :.| .|.:.:...||||.||.....||..|| |:|...:       |.:|.|:.|:|||.|.|.:
 Frog  1033 IFP-DGQLYVKSELDREVKDLYILQVSASDRAVEPLSTT-------VNVTIILEDVNDNRPLFNS 1089

  Fly   135 TPYEADVNEDAAVGTTIFDKITVKDRD----------------------IVGE-----SLDLKCL 172
            |.|.....|:.:.|:.: .:|...|:|                      :.||     ..|.:.|
 Frog  1090 TNYVFYFEEENSGGSFV-GRIYAVDKDSGSNGEIMYAFETMQPDFELNTVTGEITSTHQFDREAL 1153

  Fly   173 PQQQSPEACRKFRLHIIKRD---------------------------------ATILEAA----- 199
            .:|:...|   |.|.:...|                                 |:|.|.|     
 Frog  1154 MRQRGAAA---FTLKVTSTDLGLPKPLKDQATVQIYIRDINDNHPKFSKDLYQASISELASNMTQ 1215

  Fly   200 --------------------------------------VVLNDTLNYNQRMVYHFQIEATDG--- 223
                                                  |.|...|:|.....|...|:|.|.   
 Frog  1216 VLRVSSSDVDEGNNGLISYSIMKGNEEKHFTMDSSTGQVALVGRLDYEATASYSLIIQAVDSGAV 1280

  Fly   224 PHKTQTTFEARVKDVQDKPPVF-QGSLSTVIDEDSPINTLVLTVHARDGDTGEPRKIVYDLR-TN 286
            |....:|....|.|..|..|.| :.:|...:.|:..:..||.:|.|.|.|:|:...|.|.:. ||
 Frog  1281 PLSATSTLSIEVLDENDNSPSFPKAALFVDVVENMRVGELVSSVTATDSDSGDNADIHYSITGTN 1345

  Fly   287 PNDYFLLDAQTGELRTAKPLDREALEDSTGIISLVIRARELVNGVPSDDPLTSATAKATVTIRDV 351
            .:..|.:...||.:..||.||.|    :..:..|.|.|::..|      |..|:|....:.:||.
 Frog  1346 NHGTFSISPNTGSIFLAKKLDFE----TQALYKLNITAKDKGN------PPRSSTMSVIIKVRDF 1400

  Fly   352 NDSPPVFNHKEYSVSLLENTLPGTPLALDMSVSDADVGINSKFALR------------LDDVSGV 404
            ||:||.|...:...|::||.|.||.: |.::.:|.|..||.:....            :|:|.| 
 Frog  1401 NDNPPSFPAGDIFKSVVENVLIGTSI-LTVTATDPDADINGQLTYTIIQQKPRGNHFVIDEVRG- 1463

  Fly   405 FDVEPKLVTGYSQVNIRVANGTLDYENPNQRKFIVLVVAEETDTNPRLSSTATITVSVLDANDNK 469
                    |.|:       |..:|.|..|..:..|...........|..:...:|:.:.|.|||.
 Frog  1464 --------TIYT-------NAEIDREFANLFELTVRASDLAVPLESRKYALKNVTILISDLNDNV 1513

  Fly   470 PVF-EQESYSASVSEAALPGQYIATITARDVDSGSYGDSGIRYSLSGTGAELFHVNEQTGVISLA 533
            |.| .|.:::|..|.|.  |..::||||.|.|.||.|:  |.|.:.....|.|.|:..:|.:.:|
 Frog  1514 PTFVSQNAFAADPSLAI--GSVLSTITAFDPDEGSNGE--IEYEIISGDTETFIVDRYSGDLRVA 1574

  Fly   534 --------------NCHDNGESNRRERRDLNEDEHVEEDDG-------------EGH---LEMLS 568
                          ...|.|...:....:|.  ..:|..||             ||.   ..:::
 Frog  1575 APMLPSHLIYSLIVAATDLGAERKATTTELT--IILEGQDGPVFSQLKYITILKEGEPVGTNVIN 1637

  Fly   569 MEAATREIGTEPTVQYTLITQAPEEQASSVPLPAPVPHAAPSGVPAATANDDKAPQTC--LDYES 631
            :|||:.. ||:..|:|.:::...|.:.              .|.......:....||.  ||.|.
 Frog  1638 IEAASPR-GTDSVVEYFIVSVRCEGRT--------------VGRLFTIGRNTGVIQTAAVLDRER 1687

  Fly   632 ETTYFL--SYKATDDNGRGSASVVSLRISVTDANDSPPVCESPLYRASVDEGAVVFDSPLIVK-- 692
            ....:|  .|....:..........:.|::.|.||:|||..:.:...:|:|.  |.|...|::  
 Frog  1688 GARLYLVDVYAIEKEASLPKTQRAQVEITLQDINDNPPVFPTDILDLTVEEN--VGDGSKIMQLT 1750

  Fly   693 ARDAD--TMSRISYRIRGSEQVESIFDIDRETGQIIIRPNATLDVTNLNSDQLIFAVEANDGLFT 755
            |.|||  ..:.::|.|...  .:..|.||.|:|.:|    ||..:......:....|.|:|||.:
 Frog  1751 ATDADEGPNALVTYTIISG--ADDSFRIDPESGDLI----ATKRLDRERRSKYSLLVRADDGLQS 1809

  Fly   756 AHCGVNITVRDVNNHVPNFEQQSYSAVVEENSEIGTSVERVHATDLDTGKNAELRYRIQQGSFDD 820
            :...:|||:.|||:|:|.|.:..||..|.|::..|:.|..:.|||.|:|.|.|:.|.:...  ||
 Frog  1810 SDMRINITISDVNDHIPKFSRAVYSFDVAEDTIPGSIVAAILATDDDSGVNGEITYAVSDD--DD 1872

  Fly   821 FGIV---ETTGEVFVSRKLDFDRRNTYQLQIQASDQGTPSLTGTATLTINVQNSNDKDPYFVPAT 882
            .||.   ..||...|:|.||::.:..|.|.:.|.|.|  .......:..|:.:.||..|.|...:
 Frog  1873 DGIFFLNPVTGVFNVTRALDYELQQYYVLTVCAQDGG--GQDSCVRVYFNILDVNDNPPVFSRNS 1935

  Fly   883 QHAEVRADAPPGQLVYTLIALDPDVANHNALEFAGTDDITAIDKEGKELPHYDQFKEYFKISRNG 947
            ..|.|..:.|||..:.|....|.|...::.|.:.    |::.|..|:           |::|::|
 Frog  1936 YSASVMENLPPGSTILTFNVTDADDGFNSKLSYT----ISSGDSMGQ-----------FQVSKDG 1985

  Fly   948 KVSVNKQLDRNLFAVMRINVLVTDSTAPNVQQGRGLLIIQII--DVNKNPPRFNAPWSVEQPQIK 1010
            .:||.:.|||...:...:.|.|.|...|...:....:.:.||  |||.|||.|.:|        |
 Frog  1986 TLSVLQLLDRETQSFYSLVVQVHDMAPPPAPRYTSSVEVSIILLDVNDNPPSFISP--------K 2042

  Fly  1011 LQMVEEQ-PVGTVLTTLQANDEDS---SIGEFNI--SDNDYFAINQTSGMIYTIARLDYEVVKEV 1069
            |..|:|. |..||:...||.|.||   |..::::  |..:.|:|....|.:.....||.|.:...
 Frog  2043 LTYVQENTPTDTVVFRAQATDPDSGPNSYIQYSLLGSLGNKFSIGIIDGEVRLTGELDREDISNY 2107

  Fly  1070 KFQVTVSDTGVPALTATADVVVDIINLNDNDPKFSQSDYYFNVTENSPRGTVAGKVEAHDGDVGV 1134
            ...:...|.|.|:|:::.|:.:.::::|||.|.|||..:...::|::..||...::.|.|.|.|:
 Frog  2108 TLTIIAKDKGEPSLSSSMDMNIIVLDINDNSPHFSQRHFKVEISESTLTGTDLIQLIASDADEGI 2172

  Fly  1135 FGEITYTLI-GENNKYFSIDAYTGNVMVANSSILDREQIKELTLSVVAQDKAPAAVQKSATATIH 1198
            .|.:.|.:| |..:..|.||:.||.:.:|..  ||||:....||.:.|.|:..:  .:|.|||:.
 Frog  2173 NGMVRYAIIDGNPSNEFRIDSVTGVLSIARP--LDRERKSSYTLKIQASDRGSS--PRSDTATVS 2233

  Fly  1199 INILDVNDNAPVFTRDVYNSTVAENAAYQPPAALLQVQAIDQDEGLYGDVRYIITAGNEMGLFKL 1263
            |.:.|:||..|.|....|..:|.||.. ..|..:|||.|.|.|:||...:.|.:.:|||.|.|.|
 Frog  2234 ILLSDINDVVPKFELSPYTVSVPENLE-TLPKIILQVVARDDDQGLNSRLTYSLASGNEDGAFTL 2297

  Fly  1264 DAQSGIVYPAQSLSGK-HGAYELTISARDT-----QGSGTMESTTKAIITVLRVNRHKPEFVIPA 1322
             :.||.:...:||..: ...|.|.|:|.|.     .|:||:.      |.|..:|.:||.|   |
 Frog  2298 -SSSGQLSLIKSLDREVKEWYSLLITATDAGFPALTGTGTIS------IQVEDINDNKPTF---A 2352

  Fly  1323 LSNATIEIPGDIVQPDYLLLTVRAMDNDTEENGKVSYHLQVNNRNEQQTGEFKIDEVTGELRAKT 1387
            |::..|.||.|......:|: |...|:|..:||.:.|.|  |..|.|    |.|:..||::.:.:
 Frog  2353 LNHHFITIPEDAPTGTDILM-VNCSDSDAGQNGVIRYSL--NGGNSQ----FTINPSTGQIISSS 2410

  Fly  1388 QLNRKNRANYDIILVARDAGNPPFESLRLLSVSIVDANENRPEFPDASNPYKVSI---------- 1442
            .|:|:.:.:|.::::|.|.|:||..|...::|:|.|.|:|.|.|  ..:||...|          
 Frog  2411 LLDREAKDHYTLLVIATDGGSPPLTSTTNVTVNIRDVNDNPPRF--LHHPYVTHIPSPTTAGSFV 2473

  Fly  1443 ------NENSGRDVKI------------------------GHIQAASR---SKHNRD-------- 1466
                  :|:.|.:.::                        |.|:.||.   |.|.||        
 Frog  2474 FAVTVTDEDIGSNAELHFSLKGRNSEKFHIDPLRGAIRTAGAIEGASEITFSVHVRDGGLNSKTD 2538

  Fly  1467 --------------------------------------IF----------YYMLLGNEDGAFYVD 1483
                                                  ||          :|:..||....|::|
 Frog  2539 LTTVTVRFANKADFPLIRADRKTFTFPENQEVGTLVSTIFGSSSRGGSLSFYIASGNFGNTFHID 2603

  Fly  1484 KLTGDIYTNKSLDREETDVYTLYILASIKADLHISEEERASFSIKTLNRD------NTVAKVAIT 1542
            :|.|.:|....||.|....|.|::.|                      ||      ::..|:.||
 Frog  2604 ELNGQLYIKNPLDFETMPKYELWVEA----------------------RDMGFPPFSSYEKLEIT 2646

  Fly  1543 VLDVNDNPPVFEKPIYYAGVNANAKMGAAITLVNATDADQGKNAKIEFMIVASNLYKFGATKSTG 1607
            |||||||.|.|::..:.|.:..|......:| ::|.|.|.|.|.::|:.|...|...|       
 Frog  2647 VLDVNDNQPQFKQDPFIAEIIENLSPRKILT-ISAEDKDSGSNGQVEYTIFDGNKEAF------- 2703

  Fly  1608 SIVPSPFAISQ-DGRISANTIMAEYNQDRFELEIVARELEQPQSSASTKVNIWVFDG-------T 1664
                  |:|:: :|.|.....:......::.|.:.|.:...|..|:..||.|:|.|.       :
 Frog  2704 ------FSINRVNGEIRNTRQLDREKASQYTLSVKASDKGSPARSSIVKVIIYVLDDNDNAPRFS 2762

  Fly  1665 QLV------RVILSRPPEEVYQEQEEIIAELRNATQHRIIVD-EIRFHLD-SIGRIRMDWCDLYF 1721
            |:.      ..:|.....:|....|:..|   ||.....|.| .:.||:: :.|.|.:.      
 Frog  2763 QIFSAFVAENAVLGCFVTQVTTSDEDAGA---NAISRYTIADTSLPFHINLNTGVITVS------ 2818

  Fly  1722 HAVDPQTQQIAPVDEILKDIDRNYDYLKDYYAGFAIENVVPAYIAIVQD 1770
                      .|::.  :|.||....:..:.:|:.:...|..::..|.|
 Frog  2819 ----------RPLNR--EDNDRYIVRVSAHDSGWTVSTDVTIFVTDVND 2855

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad87ANP_731649.2 Cadherin_repeat 33..128 CDD:206637 30/102 (29%)
Cadherin_repeat 136..240 CDD:206637 31/209 (15%)
Cadherin_repeat 248..353 CDD:206637 30/105 (29%)
Cadherin_repeat 362..468 CDD:206637 25/117 (21%)
Cadherin_repeat 476..>533 CDD:206637 19/56 (34%)
CA_like <627..667 CDD:481204 9/41 (22%)
CA 692..772 CDD:214520 26/83 (31%)
Cadherin_repeat 778..873 CDD:206637 30/97 (31%)
Cadherin_repeat 882..994 CDD:206637 29/113 (26%)
Cadherin_repeat 1015..1099 CDD:206637 23/89 (26%)
Cadherin_repeat 1108..1207 CDD:206637 32/99 (32%)
Cadherin_repeat 1215..1314 CDD:206637 35/104 (34%)
Cadherin_repeat 1327..1427 CDD:206637 32/99 (32%)
Cadherin_repeat 1437..1549 CDD:206637 39/216 (18%)
Cadherin_repeat 1557..1662 CDD:206637 24/105 (23%)
fat4XP_004911174.2 Cadherin_repeat 40..123 CDD:206637
Cadherin_repeat 131..238 CDD:206637
Cadherin_repeat 246..340 CDD:206637
Cadherin_repeat 355..456 CDD:206637
Cadherin_repeat 467..560 CDD:206637
Cadherin_repeat 575..672 CDD:206637
Cadherin_repeat 680..776 CDD:206637
Cadherin_repeat 784..876 CDD:206637
Cadherin_repeat 896..979 CDD:206637 3/9 (33%)
Cadherin_repeat 987..1083 CDD:206637 30/104 (29%)
Cadherin_repeat 1092..1193 CDD:206637 15/104 (14%)
Cadherin_repeat 1202..1298 CDD:206637 16/95 (17%)
Cadherin_repeat 1308..1403 CDD:206637 30/104 (29%)
Cadherin_repeat 1415..1512 CDD:206637 25/113 (22%)
Cadherin_repeat 1527..1609 CDD:206637 22/87 (25%)
Cadherin_repeat 1621..1723 CDD:206637 21/116 (18%)
Cadherin_repeat 1734..1824 CDD:206637 30/97 (31%)
Cadherin_repeat 1832..1927 CDD:206637 31/98 (32%)
Cadherin_repeat 1935..2034 CDD:206637 29/113 (26%)
Cadherin_repeat 2044..2137 CDD:206637 24/92 (26%)
Cadherin_repeat 2145..2241 CDD:206637 31/99 (31%)
Cadherin_repeat 2250..2347 CDD:206637 35/104 (34%)
Cadherin_repeat 2357..2450 CDD:206637 32/99 (32%)
Cadherin 2459..2544 CDD:394985 12/84 (14%)
Cadherin_repeat 2561..2653 CDD:206637 26/113 (23%)
Cadherin_repeat 2661..2757 CDD:206637 25/109 (23%)
Cadherin_repeat 2764..2856 CDD:206637 20/113 (18%)
Cadherin_repeat 2870..2967 CDD:206637
Cadherin_repeat 2976..3071 CDD:206637
Cadherin_repeat 3083..3178 CDD:206637
Cadherin_repeat 3186..3281 CDD:206637
Cadherin_repeat 3291..3388 CDD:206637
Cadherin_repeat 3396..3494 CDD:206637
Cadherin_repeat 3504..3598 CDD:206637
EGF 3794..3846 CDD:394967
EGF_CA 3850..3886 CDD:238011
EGF_CA 3888..3924 CDD:238011
EGF_CA 3927..3962 CDD:238011
LamG 3965..4128 CDD:238058
EGF_CA 4155..4186 CDD:238011
Laminin_G_2 4236..4359 CDD:460494
EGF_CA 4414..4448 CDD:238011
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.