DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mthl5 and adgrg4a

DIOPT Version :10

Sequence 1:NP_001287291.1 Gene:mthl5 / 41438 FlyBaseID:FBgn0037960 Length:497 Species:Drosophila melanogaster
Sequence 2:NP_001429348.1 Gene:adgrg4a / 793963 ZFINID:ZDB-GENE-121129-2 Length:1201 Species:Danio rerio


Alignment Length:553 Identity:111/553 - (20%)
Similarity:201/553 - (36%) Gaps:128/553 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 LISLLCVLLLSLNPLPVTSHVTS----AGSSTALSSD------PNLV--LVNKCCEKFEIHVDHE 77
            ::|.:|.:..:|.  .||:.:.|    .|..|..:.|      |:|.  |:|....:|. .:..|
Zfish   647 IVSEICHITTNLT--QVTNKILSITDLMGDRTVFAGDAHNMTAPSLALQLINPDTSQFH-GLTFE 708

  Fly    78 CQQVNETDYFQPMFTSYGGEQNRPVKFKFVIGI--------PNCGS---MQMWPIYHYAGSSDKL 131
            ...| :.|....:|......:|........|.:        ||.|:   :|    :|:.|   |.
Zfish   709 VSSV-QNDGTPEIFYDENFTENPDTGTVAFISLPPTIENFFPNSGARPRVQ----FHFYG---KE 765

  Fly   132 VLLDDG----RLRHY------TNAENEAEE-------RHGIQSDYEEDIAGSLEPLYHDY----- 174
            .|.:|.    .|..|      |||.....|       || :|:..:.||   ::.:|.|:     
Zfish   766 KLFEDTSSNLTLNSYVVSASVTNATVSELEIPVMVTLRH-LQNKEDWDI---VKCVYWDFNKNDK 826

  Fly   175 -----DKGLYCIDKATSST--GEENVLFANICLARKEIKWSDSNFLLRKILNPIFHGISLVILLV 232
                 |:|...::...:.|  ..:::....:.|...:...:..:..:..|::.:..|||.:.|.|
Zfish   827 KGGWNDRGCEIVNSNATQTSCSCDHLTHFGVLLDISKTPINPKDEWVLTIISYVGCGISSIFLGV 891

  Fly   233 IAIIYFILPTLSRDLVGNIVTTIAMCLMVSQAADLVRI-FTELTSHVSFIVADIILCFSLLAAFF 296
            ..:.|.....|.||....|:..:.|.|:......||.. |....|:...|.......:..||.|.
Zfish   892 TLLTYLAFEKLRRDYPSKILINLCMALLGLNMLFLVNSWFASFNSNALCITVAAFQHYFFLATFT 956

  Fly   297 W--LNSFGFY--IWKTFRS--RNVFLRVTDGRKYCYYSAYAWGCTATMAALAVFAHFFLDAESY- 354
            |  |.:...|  :.|.|.|  .:..|      |:|   |..||...::..|.:    .:|..|| 
Zfish   957 WMGLGAINMYLALVKVFNSYVPSYIL------KFC---AVGWGIPLSVVILVL----AIDFNSYG 1008

  Fly   355 --KQEHMVGEQETIGWL--GICIFFAPIACTILV---NIFFYVTTRKLINRRTVYGRIAHKLKAN 412
              ....::.|.....|.  .:..:...::..||:   ||..:|.....|          ||::.|
Zfish  1009 TSLSTDLLQESTAFCWFKNDVTFYVTVVSFAILIMVCNIIVFVVVLVQI----------HKMRVN 1063

  Fly   413 --------FI----MFSLMLLVMSIAWLFLIMSWLQME-GLLYAHIVVNALQ-TPLLLYICVLRQ 463
                    |:    :.:.:..::.:.|:.:...|...: .|:|...::|:|| ..:.|:.|:::.
Zfish  1064 KPSSSRKGFLHDLRVVASLTFLLGLTWILVFFGWGPAKTPLMYLFSILNSLQGFFIFLFYCLMKD 1128

  Fly   464 RHVTFLLKKTCC--YNEPPSANDW------GDE 488
            ..........||  :.| ...:||      ||:
Zfish  1129 NVRKQWRMHLCCGRFRE-SEYSDWSRSVPKGDK 1160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl5NP_001287291.1 7tmB3_Methuselah-like 215..474 CDD:410632 58/287 (20%)
TM helix 1 215..239 CDD:410632 7/23 (30%)
TM helix 2 249..271 CDD:410632 5/22 (23%)
TM helix 3 281..308 CDD:410632 7/30 (23%)
TM helix 4 324..344 CDD:410632 5/19 (26%)
TM helix 5 371..396 CDD:410632 5/27 (19%)
TM helix 6 409..435 CDD:410632 3/37 (8%)
TM helix 7 438..463 CDD:410632 7/26 (27%)
adgrg4aNP_001429348.1 None

Return to query results.
Submit another query.