DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mthl5 and Adgrf4

DIOPT Version :9

Sequence 1:NP_001287291.1 Gene:mthl5 / 41438 FlyBaseID:FBgn0037960 Length:497 Species:Drosophila melanogaster
Sequence 2:XP_006244702.1 Gene:Adgrf4 / 501106 RGDID:1565216 Length:698 Species:Rattus norvegicus


Alignment Length:510 Identity:111/510 - (21%)
Similarity:182/510 - (35%) Gaps:173/510 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 SSTALSSDPNLVLVNKCCEKFEIHVDHECQQVNETDYFQPMFTSYGGEQNRPVKFKFVIGIPNCG 114
            ||..|.|      ||...:|.:||...| ..|:|      :|....|.:         |.....|
  Rat   215 SSDLLDS------VNSFAKKLQIHGKSE-SVVDE------LFIQTKGSR---------ISHGTSG 257

  Fly   115 SMQMWPIYHYAGSSDKLVLLDDGR--LRHYTNAENEA------------EERHGIQSDYEEDI-- 163
            :.....:..|..:.|.|||::..|  |:..::..::|            :|.|...|..::.|  
  Rat   258 NSLSLSVPRYNATEDVLVLIEIPRQALQELSSNTSQAIAVAFPTLGAILKEVHQPNSSLQKPIND 322

  Fly   164 -------AGSLEPLYHDYDKGLYCIDKATSSTGEENVLFANICLA--RKEIKW--------SDSN 211
                   ...|..:...:||    |:|:.|::.:        |::  .:|.:|        ||.|
  Rat   323 LILSLVLPEGLNEIILTFDK----INKSQSTSSQ--------CVSWDAEERQWDESPCTVMSDIN 375

  Fly   212 FLLR-----------------------KILNPI-FHGI-----SLVILLVI-AIIYFILPTLSRD 246
            ..::                       .|||.| |.|:     |||:.||| ||::      ||.
  Rat   376 STVKCRCRHNKAVMSFSILMSSKPVKDMILNRITFIGLSVSIFSLVLCLVIEAIVW------SRV 434

  Fly   247 LVGNIVTTIAMCLMVSQAADLVRIFTELTSHVSFI----------------VADIILC-FSLLAA 294
            :|..|.....:|: |:.|..|      ||::|.||                ||....| |..|:.
  Rat   435 VVTEISYMRHVCI-VNIAVSL------LTANVWFIIGSNFSANAQEDHKWCVAVTFFCHFFFLSL 492

  Fly   295 FFW------LNSFGFYIWKTFRSRNVFLRVTDGRKYCYYSAYAWGCTATMAALAVFAHFFLDAES 353
            |||      |..:|..:        ||.|:...|......|..:||...:|.:.|  ......|.
  Rat   493 FFWMLFKALLIVYGILV--------VFRRMMKSRMMAIGFAIGYGCPLVIAVITV--SVTEPGEG 547

  Fly   354 YKQEHMVGEQETIGWL------GICIFFAPIACTILVNIFFYVTTRKLIN-RRTVYG-------R 404
            |.:....       ||      .:..|..|....:.||:...:|.  .|| :|.:.|       .
  Rat   548 YTRRDAC-------WLNWNQTKALFAFAIPALAIVAVNLLVVLTV--AINTQRPLIGSSKSQDMA 603

  Fly   405 IAHKLKANFIMFSLMLLVMSIAWLFLIMSWLQMEGLLYAHIV---VNALQTPLLL 456
            |..::..|   .:::..::.:.|.|.:.:.|:...|:: ||:   :||.|...:|
  Rat   604 IVFRISKN---VAILTPLLGLTWGFGLTTLLEGTHLVF-HIIFALLNAFQGLFIL 654

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl5NP_001287291.1 7tm_4 212..451 CDD:304433 69/308 (22%)
Adgrf4XP_006244702.1 GPS 351..394 CDD:280071 6/50 (12%)
7tm_4 408..653 CDD:304433 67/280 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.