DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl5 and Adgrf4

DIOPT Version :10

Sequence 1:NP_001287291.1 Gene:mthl5 / 41438 FlyBaseID:FBgn0037960 Length:497 Species:Drosophila melanogaster
Sequence 2:NP_001386280.1 Gene:Adgrf4 / 501106 RGDID:1565216 Length:698 Species:Rattus norvegicus


Alignment Length:510 Identity:111/510 - (21%)
Similarity:182/510 - (35%) Gaps:173/510 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 SSTALSSDPNLVLVNKCCEKFEIHVDHECQQVNETDYFQPMFTSYGGEQNRPVKFKFVIGIPNCG 114
            ||..|.|      ||...:|.:||...| ..|:|      :|....|.:         |.....|
  Rat   215 SSDLLDS------VNSFAKKLQIHGKSE-SVVDE------LFIQTKGSR---------ISHGTSG 257

  Fly   115 SMQMWPIYHYAGSSDKLVLLDDGR--LRHYTNAENEA------------EERHGIQSDYEEDI-- 163
            :.....:..|..:.|.|||::..|  |:..::..::|            :|.|...|..::.|  
  Rat   258 NSLSLSVPRYNATEDVLVLIEIPRQALQELSSNTSQAIAVAFPTLGAILKEVHQPNSSLQKPIND 322

  Fly   164 -------AGSLEPLYHDYDKGLYCIDKATSSTGEENVLFANICLA--RKEIKW--------SDSN 211
                   ...|..:...:||    |:|:.|::.:        |::  .:|.:|        ||.|
  Rat   323 LILSLVLPEGLNEIILTFDK----INKSQSTSSQ--------CVSWDAEERQWDESPCTVMSDIN 375

  Fly   212 FLLR-----------------------KILNPI-FHGI-----SLVILLVI-AIIYFILPTLSRD 246
            ..::                       .|||.| |.|:     |||:.||| ||::      ||.
  Rat   376 STVKCRCRHNKAVMSFSILMSSKPVKDMILNRITFIGLSVSIFSLVLCLVIEAIVW------SRV 434

  Fly   247 LVGNIVTTIAMCLMVSQAADLVRIFTELTSHVSFI----------------VADIILC-FSLLAA 294
            :|..|.....:|: |:.|..|      ||::|.||                ||....| |..|:.
  Rat   435 VVTEISYMRHVCI-VNIAVSL------LTANVWFIIGSNFSANAQEDHKWCVAVTFFCHFFFLSL 492

  Fly   295 FFW------LNSFGFYIWKTFRSRNVFLRVTDGRKYCYYSAYAWGCTATMAALAVFAHFFLDAES 353
            |||      |..:|..:        ||.|:...|......|..:||...:|.:.|  ......|.
  Rat   493 FFWMLFKALLIVYGILV--------VFRRMMKSRMMAIGFAIGYGCPLVIAVITV--SVTEPGEG 547

  Fly   354 YKQEHMVGEQETIGWL------GICIFFAPIACTILVNIFFYVTTRKLIN-RRTVYG-------R 404
            |.:....       ||      .:..|..|....:.||:...:|.  .|| :|.:.|       .
  Rat   548 YTRRDAC-------WLNWNQTKALFAFAIPALAIVAVNLLVVLTV--AINTQRPLIGSSKSQDMA 603

  Fly   405 IAHKLKANFIMFSLMLLVMSIAWLFLIMSWLQMEGLLYAHIV---VNALQTPLLL 456
            |..::..|   .:::..::.:.|.|.:.:.|:...|:: ||:   :||.|...:|
  Rat   604 IVFRISKN---VAILTPLLGLTWGFGLTTLLEGTHLVF-HIIFALLNAFQGLFIL 654

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl5NP_001287291.1 7tmB3_Methuselah-like 215..474 CDD:410632 71/312 (23%)
TM helix 1 215..239 CDD:410632 14/53 (26%)
TM helix 2 249..271 CDD:410632 5/21 (24%)
TM helix 3 281..308 CDD:410632 11/49 (22%)
TM helix 4 324..344 CDD:410632 4/19 (21%)
TM helix 5 371..396 CDD:410632 5/24 (21%)
TM helix 6 409..435 CDD:410632 3/25 (12%)
TM helix 7 438..463 CDD:410632 7/22 (32%)
Adgrf4NP_001386280.1 GPS 352..394 CDD:460350 6/49 (12%)
7tmB2_GPR111_115 402..669 CDD:320660 71/289 (25%)
TM helix 1 404..429 CDD:320660 12/24 (50%)
TM helix 2 444..466 CDD:320660 9/28 (32%)
TM helix 3 479..506 CDD:320660 9/26 (35%)
TM helix 4 520..540 CDD:320660 5/21 (24%)
TM helix 5 560..589 CDD:320660 6/30 (20%)
TM helix 6 605..631 CDD:320660 3/28 (11%)
TM helix 7 636..661 CDD:320660 7/20 (35%)

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