DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl5 and Adgrb3

DIOPT Version :10

Sequence 1:NP_001287291.1 Gene:mthl5 / 41438 FlyBaseID:FBgn0037960 Length:497 Species:Drosophila melanogaster
Sequence 2:NP_001100368.1 Gene:Adgrb3 / 301309 RGDID:1309703 Length:1522 Species:Rattus norvegicus


Alignment Length:407 Identity:81/407 - (19%)
Similarity:148/407 - (36%) Gaps:113/407 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 LRHYTNAENE------AEERHGIQSDYEEDIA----GSLEPLYHDYDKGLYCI----DKATSSTG 189
            ||:||...::      ..|.....:..|.::|    |:|.|         ||:    .|:..|.|
  Rat   777 LRNYTVVNSKIIVVTIRPEPKRTDAFLEIELAHLANGTLNP---------YCVLWDDSKSNESLG 832

  Fly   190 E------ENVL---------------FANICLARKEIKWSDSNFLLRKILNPIFHGISLVILLVI 233
            .      :.||               ||.:....:||....|.  ...:...:..|:|.:.|:.:
  Rat   833 TWSTQGCKTVLTDASHTKCLCDRLSTFAILAQQPREIVMESSG--TPSVTLIVGSGLSCLALITL 895

  Fly   234 AIIYFILPTLSRDLVGNIVTTIAMCLMVSQAADLVRIFTELTSHVSF-IVADIILCFSLLAAFFW 297
            |::|..|....|.  ...:..|..||.:..:..|:.:....|.:.|. ......|.|..||:|.|
  Rat   896 AVVYAALWRYIRS--ERSIILINFCLSIISSNILILVGQTQTHNKSICTTTTAFLHFFFLASFCW 958

  Fly   298 LNSFGFYIWKTFRSRNVFLRVTDGRKYCYYSAYAWGCTATMAALAVFAHFFLDAESYKQEHMVGE 362
            :.:   ..|:::.:....:|....||  .:....||..|.:.|.:|   .|...:.|..:|..  
  Rat   959 VLT---EAWQSYMAVTGKIRTRLIRK--RFLCLGWGLPALVVATSV---GFTRTKGYGTDHYC-- 1013

  Fly   363 QETIGWLG-----ICIFFAPIACTILVNIFFYVTT-RKLINRRTVYGRIAHKLK----------- 410
                 ||.     :..|..|.|..:|||:...:.. .||::|.   |.:..|||           
  Rat  1014 -----WLSLEGGLLYAFVGPAAAVVLVNMVIGILVFNKLVSRD---GILDKKLKHRAGQMSEPHS 1070

  Fly   411 ---------------------ANFIMFSL-----MLLVMSIAWLFLIMSWLQMEGLLYAHI--VV 447
                                 |:..|.||     :|.::::.|:..:::......:|:..:  |.
  Rat  1071 GLTLKCAKCGVVSTTALSAATASNAMASLWSSCVVLPLLALTWMSAVLAMTDKRSILFQILFAVF 1135

  Fly   448 NALQTPLLLYI-CVLRQ 463
            ::||..:::.: |:||:
  Rat  1136 DSLQGFVIVMVHCILRR 1152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl5NP_001287291.1 7tmB3_Methuselah-like 215..474 CDD:410632 59/296 (20%)
TM helix 1 215..239 CDD:410632 5/23 (22%)
TM helix 2 249..271 CDD:410632 4/21 (19%)
TM helix 3 281..308 CDD:410632 7/26 (27%)
TM helix 4 324..344 CDD:410632 4/19 (21%)
TM helix 5 371..396 CDD:410632 7/25 (28%)
TM helix 6 409..435 CDD:410632 8/62 (13%)
TM helix 7 438..463 CDD:410632 6/27 (22%)
Adgrb3NP_001100368.1 AGRB_N 30..201 CDD:465991
TSP1 296..343 CDD:214559
TSP1 348..398 CDD:214559
TSP1 403..452 CDD:214559
TSP1 458..508 CDD:214559
HormR 510..576 CDD:214468
GAIN 594..794 CDD:465137 4/16 (25%)
GPS 816..867 CDD:197639 10/59 (17%)
7tmB2_BAI3 872..1164 CDD:320655 60/303 (20%)
TM helix 1 876..901 CDD:320655 5/24 (21%)
TM helix 2 911..933 CDD:320655 4/21 (19%)
TM helix 3 942..970 CDD:320655 7/30 (23%)
TM helix 4 980..1000 CDD:320655 7/24 (29%)
TM helix 5 1018..1047 CDD:320655 6/28 (21%)
TM helix 6 1094..1121 CDD:320655 5/26 (19%)
TM helix 7 1126..1151 CDD:320655 5/24 (21%)
Blue background indicates that the domain is not in the aligned region.

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