DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mthl5 and adgrf3a

DIOPT Version :10

Sequence 1:NP_001287291.1 Gene:mthl5 / 41438 FlyBaseID:FBgn0037960 Length:497 Species:Drosophila melanogaster
Sequence 2:XP_021322955.3 Gene:adgrf3a / 101886922 ZFINID:ZDB-GENE-131121-607 Length:997 Species:Danio rerio


Alignment Length:293 Identity:66/293 - (22%)
Similarity:114/293 - (38%) Gaps:72/293 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   224 GISLVILLVIAII-YFILPTLSRDLVGNI----VTTIAMCLMVSQAADLVRIFTELTSHVSFI-- 281
            |||::.||...|| ..:...:.:..:.|.    :..|::||:::....|.      ||....|  
Zfish   709 GISILSLLACLIIKVLVWDAVVKSPISNFRHVALFNISLCLLLAHCMFLT------TSKPESIPP 767

  Fly   282 ----VADIILCFSLLAAFFWLNSFGF-------YIWKTFRSRNVF--LRVTDGRKYCYYSAYAWG 333
                :..:|..|..||.|||:....|       |::...| :.||  |.:|.|          :.
Zfish   768 NWCSILTLIKHFFFLAVFFWMLCLSFVLLHQMIYVFDRLR-KKVFLGLSITVG----------YA 821

  Fly   334 CTATMAALAVFAHFFLDAESYKQEHMVGE--QETIGWL--------GICIFFAPIACTILVNIFF 388
            | ..:|....:..|...||        ||  .::..||        .|..|..||...:.||:|.
Zfish   822 C-PIIAVAVTYISFNNGAE--------GEYYSKSTCWLTYKGTLKGSIFAFIIPIGAIVFVNLFT 877

  Fly   389 YVTTRKLINRRTVYGRIAHKLK--ANFIMFSLMLL--VMSIAWL--FLIMS-------WLQMEGL 440
            .......|...::....|...|  |..::.:::.|  |:.::|:  |.::.       |..:  :
Zfish   878 LAVVIMKIATPSISEAKARDEKDVAKSMIKTIVFLSPVLGLSWVLGFFVLGLDLTVKPWAAL--V 940

  Fly   441 LYAHIVVNALQ-TPLLLYICVLRQRHVTFLLKK 472
            .|:..:.|:|| ..:||..||..::....|||:
Zfish   941 NYSFTIFNSLQGLFILLTNCVGEKKVRDALLKR 973

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl5NP_001287291.1 7tmB3_Methuselah-like 215..474 CDD:410632 66/293 (23%)
TM helix 1 215..239 CDD:410632 7/15 (47%)
TM helix 2 249..271 CDD:410632 5/25 (20%)
TM helix 3 281..308 CDD:410632 10/39 (26%)
TM helix 4 324..344 CDD:410632 2/19 (11%)
TM helix 5 371..396 CDD:410632 7/24 (29%)
TM helix 6 409..435 CDD:410632 6/38 (16%)
TM helix 7 438..463 CDD:410632 8/25 (32%)
adgrf3aXP_021322955.3 None

Return to query results.
Submit another query.