DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31368 and SEN1

DIOPT Version :9

Sequence 1:NP_996198.2 Gene:CG31368 / 41437 FlyBaseID:FBgn0051368 Length:1486 Species:Drosophila melanogaster
Sequence 2:NP_013534.3 Gene:SEN1 / 851150 SGDID:S000004422 Length:2231 Species:Saccharomyces cerevisiae


Alignment Length:1915 Identity:352/1915 - (18%)
Similarity:628/1915 - (32%) Gaps:680/1915 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LTVSQLSSDVIWQLASQYWTPDTKADHLPYSAKIIERIYNEEIGDGGGHSARRINMLEFSQYLEQ 90
            |::....|.||:     .|...:|.:: .:|...::.:|:...         .||:        .
Yeast   227 LSIKTFISGVIF-----CWCEGSKEEN-EWSRAFLKDLYSRNF---------HINL--------S 268

  Fly    91 YLWPHYQRETATH-------AHLMSIVIMANEKFRER-VEVWTVFEK------------------ 129
            .|.|....|...|       |:...||:   .:|..| :.|:.:|:|                  
Yeast   269 NLTPDIIEEVYIHILFLQNPANWTEIVV---SQFWSRLLPVFNLFDKDVFIEYFQVPKNVESLKK 330

  Fly   130 -----LPDQYPAFFRHVLESCLPSKKAKEASSTLRERTALLMFINH------------------- 170
                 |...:..::.|:.:    |...|.....||   .|.||:|.                   
Yeast   331 TFKFPLEPIFKMWYNHLSK----SYHDKPLDFLLR---GLTMFLNKFGSEFWSKIEPFTFHSILD 388

  Fly   171 -CFN--SMEIELCREQAKRLV--------------------SLSMWHCLQPRRREQELREVPEWR 212
             .||  |..|:|.:.|...:|                    :|..:|.|.|.:|.|.:|:|.   
Yeast   389 IIFNRDSFPIKLIKIQDNPIVEHQTEVYFQLTGSVTDLLSWTLPFYHALSPSKRIQMVRKVS--- 450

  Fly   213 KYWKRLLKKEKDSKPEVLWERHFMQNLIIDFLHILESIPAEGEVPRN-VVHYCERFLEFIIDLE- 275
                                        :.||.|:.:.|:...:|:. :::.....|..::.:: 
Yeast   451 ----------------------------MAFLRIIANYPSLKSIPKACLMNSATALLRAVLTIKE 487

  Fly   276 ---ALLPTRRFFNTVL----DDCHLIVRALLSPLVRREEGK---------------------LFG 312
               |:|.....|.|||    |...|:...|:..::.|....                     :..
Yeast   488 NERAMLYKNDEFETVLLTKTDSRALLNNPLIQDIIIRSASNPNDFYPGLGAASASVATSTMMVLA 552

  Fly   313 QLLDM---------LKFYTRFEINDVTGS-----SLTDH-DMTQLHYKKITSLQRAVFAKFPSLR 362
            :.:|.         .|.|:...|:::..|     ::|:. |:...|...:.:.|..|..|..:..
Yeast   553 ECIDFDILLLCHRTFKLYSGKPISEIPISTNVLENVTNKIDLRSFHDGPLLAKQLLVSLKNINGL 617

  Fly   363 VFALSNVATVDNRESLEQHFGGLDGKGLLQIATFL-----NLVPEEVVSPLDWHRV---DEQF-- 417
            :...||.|..:...:|.|.|..|..:.:.:.|..|     .::.:|..|...|..:   |:..  
Yeast   618 LIVPSNTAVAEAHNALNQKFLLLSTRLMEKFADILPGQLSKILADEDASQGFWSCIFSSDKHLYQ 682

  Fly   418 ---------------LRELLITRHERRCSQLEALNEM---------------------------- 439
                           |..:|...:......|:.:|.|                            
Yeast   683 AATNILYNTFDVEGRLEGILAILNSNLTVNLKNINVMLQRLINCEFYEPCPRAVRVLMDVVSAFV 747

  Fly   440 -PL---YPTEQIIWDENVVPSEYYSGDSCL----ALPKLNLQFLTLHDYL-LRNFNLFRL----- 490
             |:   :...|.:..:|.........:||.    .:.|..|::.:.:||. |.||....|     
Yeast   748 DPISGVFANFQTLKSQNTEKEFLKFWESCWLFLDTIYKFTLKWASKYDYSELENFTKDTLDLSRS 812

  Fly   491 -------------ESTYEIRQDIEDAVSRMLPWKSEDGDVVFGGWARMALPIASFA--------- 533
                         :.|..:..::.:....||.|.....:|:.....|:.:..:..|         
Yeast   813 LVDSFREFSDILHDQTKNLLLNVLETFKNMLYWLRLSDEVLLESCVRLIISTSDLAHEKHVKVDD 877

  Fly   534 -VVEVAKPH----------LGEKKPSRVRADVGV-TLSVRREIKAEWENLRKH----------DV 576
             :||:...:          |.|::.|.:.....: ..::..|:..|.||.||.          |:
Yeast   878 SLVEMMAKYASKAKRFSNKLTEQQASEILQKAKIFNKALTEEVATEAENYRKEKELSRLGKVIDL 942

  Fly   577 CFLITVKPT-------------------------------------QP----YGT-------KYK 593
            ...:...|:                                     ||    :||       |..
Yeast   943 TDSVPASPSLSPSLSSTIASSSAESRADYLQRKALSSSITGRPRVAQPKITSFGTFQSSANAKLH 1007

  Fly   594 HREPFVPQVGLVSVRGCEVEGMLDANGRVIEDGPEPRPQLQGENRCYRVWLDSNQYRLDMDDLQE 658
            ..:|..|      :...|:..|...|.||:.  |...|....::|..     ||:   :.|...|
Yeast  1008 RTKPVKP------LSKMELARMQLLNNRVVH--PPSAPAFHTKSRGL-----SNK---NDDSSSE 1056

  Fly   659 GADDVYES----FNI----------------LMRRKPKENNFKAVLETIRHLMNTECVVPPWLHD 703
            .:|:..||    |.|                :::|:......|..||.:|..:|.:  :.| |::
Yeast  1057 ESDNDIESARELFAIAKAKGKGIQTVDINGKVVKRQTAAELAKQELEHMRKRLNVD--MNP-LYE 1118

  Fly   704 ILLGYGDPGAAHYSNMPNQERSLEFNDTFMDYNHLEASFPQYNLKCEVPVENRQ----------- 757
            |:|.:.....:.|   |:.|....::|. .|:.:..|.: |..:|..:.:|:.|           
Yeast  1119 IILQWDYTRNSEY---PDDEPIGNYSDV-KDFFNSPADY-QKVMKPLLLLESWQGLCSSRDREDY 1178

  Fly   758 PPFRLI---------FEDV-------PIQ----KESD----GEDPEEKPEEKLTK---------- 788
            .||.:|         |.||       .||    .|||    ...|:.:|:::|:.          
Yeast  1179 KPFSIIVGNRTAVSDFYDVYASVAKQVIQDCGISESDLIVMAYLPDFRPDKRLSSDDFKKAQHTC 1243

  Fly   789 ---------------------------------------------SILVQPYK-------YEARG 801
                                                         :.:.:.|.       |:..|
Yeast  1244 LAKVRTLKNTKGGNVDVTLRIHRNHSFSKFLTLRSEIYCVKVMQMTTIEREYSTLEGLEYYDLVG 1308

  Fly   802 PYPSDKPK-------------QNSIRFTPTQVEAI-RAGMQPGLTLVVGPPGTGKTDVAVQII-- 850
            .....||.             :.|.:...:|.||| .:..:.|.:|:.||||||||...:.||  
Yeast  1309 QILQAKPSPPVNVDAAEIETVKKSYKLNTSQAEAIVNSVSKEGFSLIQGPPGTGKTKTILGIIGY 1373

  Fly   851 ---------SNIY-----HNHPN-------QRTLIVTHSNQALNQLFEKIMALDIDER------H 888
                     ||:.     .|..|       |:.||...||.|::::..::.:...|::      .
Yeast  1374 FLSTKNASSSNVIKVPLEKNSSNTEQLLKKQKILICAPSNAAVDEICLRLKSGVYDKQGHQFKPQ 1438

  Fly   889 LLRLGHGEEALETEKDYS-------RYGRVNYVLAKRMDLLSQVQKLQEALGVSGDNAYTCETAG 946
            |:|:|..:......||.:       |.|..||.:....:|                         
Yeast  1439 LVRVGRSDVVNVAIKDLTLEELVDKRIGERNYEIRTDPEL------------------------- 1478

  Fly   947 YFYLYNVMARWEKFQSQISVHKGEADAEKLRAEFEKEFPFGKFFADAPQPLFKGANYDELMDIAC 1011
                      ..||.:.::..:      :||.:.:.|       :..|:......:..:|.    
Yeast  1479 ----------ERKFNNAVTKRR------ELRGKLDSE-------SGNPESPMSTEDISKLQ---- 1516

  Fly  1012 SNFRYISDIFNEL----EEFR---AFELLRTGLDRSKYLLVKEAKIIAMT---C-THAALKRKEL 1065
            ...|.:|.|.|||    :|.|   :.......|||..    .:|.|:|::   | |.:......|
Yeast  1517 LKIRELSKIINELGRDRDEMREKNSVNYRNRDLDRRN----AQAHILAVSDIICSTLSGSAHDVL 1577

  Fly  1066 VNLGFRYDNILMEESAQILEIETFIPLLLQNPLDGLNRLKRWIMIGDHHQLPPVIKNMAFQKYSN 1130
            ..:|.::|.::::|:.|..|:.:.|||....        ||.||:||.:||||.:.:.|...: .
Yeast  1578 ATMGIKFDTVIIDEACQCTELSSIIPLRYGG--------KRCIMVGDPNQLPPTVLSGAASNF-K 1633

  Fly  1131 MEQSLFTRLVRLGVPTVDLDGQGRARASI-----CSLYKWRYKKLEDLQHIFERDEYKQANPGFV 1190
            ..||||.|:.:...|.: ||.|.|...||     ...|:.|.|....:. |..:..:.|..|  :
Yeast  1634 YNQSLFVRMEKNSSPYL-LDVQYRMHPSISKFPSSEFYQGRLKDGPGMD-ILNKRPWHQLEP--L 1694

  Fly  1191 HDYQLINVEDFKGVGESEPNPYFYQNLAEAEYIVAV--YMYMRL---LGYPAAKISILTTYNGQK 1250
            ..|:..::  ..|..|.......|.|:.|....:.:  |::.:.   :.: ..||.|::.|..|.
Yeast  1695 APYKFFDI--ISGRQEQNAKTMSYTNMEEIRVAIELVDYLFRKFDNKIDF-TGKIGIISPYREQM 1756

  Fly  1251 HLIRDVINARCGNNPLIGWPHKITTVDKYQGQQNDYILISLVR---TK-AVGHLRDVRRLVVAMS 1311
            ..:|.......|.  :|.......|:|.:|||:.:.||||.||   || :||.|:|.||:.||::
Yeast  1757 QKMRKEFARYFGG--MINKSIDFNTIDGFQGQEKEIILISCVRADDTKSSVGFLKDFRRMNVALT 1819

  Fly  1312 RARLGLYVFGRVSLFKNCLELQQTFKLLTQRPLKLSLVPEDKFPTDRLASAAVASQDIKTVENMS 1376
            ||:..::|.|..             :.|.:..|...|:.:.|   ||...|...|..:....|  
Yeast  1820 RAKTSIWVLGHQ-------------RSLAKSKLWRDLIEDAK---DRSCLAYACSGFLDPRNN-- 1866

  Fly  1377 EMAQFVYERYMAKMEELKGTLPSEEE--------------------LEAMRNQLLQEDEESVPEA 1421
             .||.:..::..       .:|||:|                    .:..:.:::.|.||:....
Yeast  1867 -RAQSILRKFNV-------PVPSEQEDDYKLPMEYITQGPDEVKSNKDTKKRRVVDEGEEADKAV 1923

  Fly  1422 SEEPPEKRAAKEEPLS---KKKTTEAFKPT 1448
            .::..||:..|::..:   ||...:|..|:
Yeast  1924 KKKKKEKKKEKKKSKADDKKKNNKKAESPS 1953

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31368NP_996198.2 Aquarius_N 33..815 CDD:293008 188/1188 (16%)
AAA_11 818..1123 CDD:289831 79/352 (22%)
AAA_19 821..893 CDD:289986 28/101 (28%)
DNA2 <1012..1348 CDD:224037 96/360 (27%)
UvrD_C_2 1131..1321 CDD:304668 57/203 (28%)
SEN1NP_013534.3 SEN1_N 106..859 CDD:403815 110/695 (16%)
DNA2 1006..1858 CDD:224037 204/965 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3418
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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