DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6959 and SLITRK2

DIOPT Version :10

Sequence 1:NP_650122.1 Gene:CG6959 / 41434 FlyBaseID:FBgn0037956 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_115928.1 Gene:SLITRK2 / 84631 HGNCID:13449 Length:845 Species:Homo sapiens


Alignment Length:375 Identity:83/375 - (22%)
Similarity:137/375 - (36%) Gaps:103/375 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 PAACSCGQEMYESEMQYVVNCTNAGLVNTSVLEFMPEQVEVLIFTGNRITELPWNVFGSINNYKQ 96
            |::|.|..:..::.:.  |||......|.|.|:..|...:.|..|||.:..:..|   .:..|..
Human   341 PSSCVCTSQSSDNGLN--VNCQERKFTNISDLQPKPTSPKKLYLTGNYLQTVYKN---DLLEYSS 400

  Fly    97 LRIVDMSSNHIREIRGKSYHHVPRVERLILNHNNLSISRYEDEVNHHHPRVFSNFINLQSLHLTD 161
            |.::.:.:|.|..|:..::.::..:.||.||.|.|.:.         :|.:|....:||.|:|  
Human   401 LDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVL---------YPSMFDGLQSLQYLYL-- 454

  Fly   162 AFEDNSSPQLSEDLHDIFVNSQLVKLQKLHLEQNEITHFKDRNVFCDLPSLRDLHLGDNDLRDLN 226
              |.|...::.....|..:|.||:              |.:.|:   |.||.|...|...|..||
Human   455 --EYNVIKEIKPLTFDALINLQLL--------------FLNNNL---LRSLPDNIFGGTALTRLN 500

  Fly   227 FEVRCLNNLRFLDLERNKFSFVKPTDLRVLNELEERPNRTANLIVDFNLNPFGCDCRTAPFRAWI 291
                         |..|.||     .|.|...|::.|   |.:.:|...||:.|.|.....:.| 
Human   501 -------------LRNNHFS-----HLPVKGVLDQLP---AFIQIDLQENPWDCTCDIMGLKDW- 543

  Fly   292 TTTRVTVRNKDSLMCFHSTGHVDAEPAHLLQMDMGQCADAIAAAATILN------TAEDEPHYGD 350
                              |.|.:: |..:.::   .|......|..||.      ...|.|:..|
Human   544 ------------------TEHANS-PVIINEV---TCESPAKHAGEILKFLGREAICPDSPNLSD 586

  Fly   351 ------------PEASHLQPQAHISGHTATLIFLLIVLTMILLGLLVALV 388
                        |.:..:.|.::...||.      :.|::::|||||..:
Human   587 GTVLSMNHNTDTPRSLSVSPSSYPELHTE------VPLSVLILGLLVVFI 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6959NP_650122.1 LRR <69..>278 CDD:443914 49/208 (24%)
leucine-rich repeat 70..96 CDD:275380 6/25 (24%)
leucine-rich repeat 97..120 CDD:275380 4/22 (18%)
leucine-rich repeat 121..153 CDD:275380 8/31 (26%)
leucine-rich repeat 154..186 CDD:275380 10/31 (32%)
leucine-rich repeat 187..211 CDD:275380 3/23 (13%)
leucine-rich repeat 212..234 CDD:275380 6/21 (29%)
leucine-rich repeat 235..258 CDD:275380 6/22 (27%)
LRRCT 276..328 CDD:214507 8/51 (16%)
SLITRK2NP_115928.1 LRR 1 63..84
LRR <66..>197 CDD:443914
leucine-rich repeat 67..87 CDD:275380
LRR 2 87..108
leucine-rich repeat 88..111 CDD:275380
LRR 3 111..132
leucine-rich repeat 112..135 CDD:275380
LRR 4 135..156
leucine-rich repeat 136..159 CDD:275380
LRR 5 159..180
leucine-rich repeat 160..181 CDD:275380
Required for interaction with PTPRD. /evidence=ECO:0000250|UniProtKB:Q810C0 167..215
leucine-rich repeat 208..369 CDD:275380 7/29 (24%)
LRRCT 216..>252 CDD:214507
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 263..321
leucine-rich repeat 370..400 CDD:275380 8/32 (25%)
LRR 7 376..397 5/23 (22%)
LRR <378..>529 CDD:443914 48/204 (24%)
LRR_8 399..459 CDD:404697 18/72 (25%)
LRR 8 400..421 4/20 (20%)
leucine-rich repeat 401..424 CDD:275380 4/22 (18%)
LRR 9 424..445 8/29 (28%)
leucine-rich repeat 425..448 CDD:275380 8/31 (26%)
LRR 10 448..469 6/24 (25%)
leucine-rich repeat 449..468 CDD:275380 6/22 (27%)
LRR 11 472..493 9/37 (24%)
leucine-rich repeat 473..491 CDD:275380 8/34 (24%)
LRR 12 495..516 9/38 (24%)
leucine-rich repeat 496..509 CDD:275378 7/30 (23%)
leucine-rich repeat 521..533 CDD:275378 3/11 (27%)
LRRCT 529..579 CDD:214507 12/72 (17%)
Blue background indicates that the domain is not in the aligned region.

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